Homologs in group_2117

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15905 FBDBKF_15905 92.5 Morganella morganii S1 fadM Acyl-CoA thioesterase FadM
EHELCC_18505 EHELCC_18505 92.5 Morganella morganii S2 fadM Acyl-CoA thioesterase FadM
NLDBIP_17340 NLDBIP_17340 92.5 Morganella morganii S4 fadM Acyl-CoA thioesterase FadM
LHKJJB_17320 LHKJJB_17320 92.5 Morganella morganii S3 fadM Acyl-CoA thioesterase FadM
HKOGLL_17075 HKOGLL_17075 92.5 Morganella morganii S5 fadM Acyl-CoA thioesterase FadM
PMI_RS00585 PMI_RS00585 52.2 Proteus mirabilis HI4320 - thioesterase family protein

Distribution of the homologs in the orthogroup group_2117

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2117

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77712 2.11e-49 157 59 0 128 1 fadM Long-chain acyl-CoA thioesterase FadM Escherichia coli (strain K12)
S4TE15 2.37e-05 45 22 2 125 2 TE3 Acyl-acyl carrier protein thioesterase TE3, chloroplastic Humulus lupulus
F4HX80 6.47e-05 43 22 2 125 2 ALT4 Acyl-acyl carrier protein thioesterase ATL4, chloroplastic Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16405
Feature type CDS
Gene -
Product thioesterase family protein
Location 97866 - 98270 (strand: -1)
Length 405 (nucleotides) / 134 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2117
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13279 Thioesterase-like superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0824 Lipid transport and metabolism (I) I Acyl-CoA thioesterase FadM

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12500 thioesterase III [EC:3.1.2.-] - -

Protein Sequence

MSTKIKVLGYHIDAFGHVNNARYLEFLEAARWDWLESYDAYRWFKQMDIAVVVVNININYRLPVHLGERLIIDSYLQHSGQKSGVLKQIVTRQEDKQVVADAEVTFVFINLKTGKALPIEGEIRDKFELLTAPE

Flanking regions ( +/- flanking 50bp)

TTCAAACCGGAAATGTATGAAACCGGAAATGTATTAAAGGGAGAGATATTATGAGCACCAAAATTAAAGTGCTTGGCTACCATATTGATGCCTTCGGACATGTTAACAATGCGCGTTATCTGGAGTTTCTGGAAGCGGCACGCTGGGACTGGCTGGAAAGCTATGATGCTTACCGCTGGTTTAAGCAGATGGATATCGCGGTTGTTGTGGTTAATATTAATATCAATTACCGGCTGCCGGTGCATCTGGGGGAGCGCCTGATTATTGACAGTTACCTGCAACACTCAGGGCAGAAGAGCGGCGTTCTCAAACAGATAGTGACCCGGCAGGAAGATAAACAGGTTGTGGCAGATGCCGAAGTGACCTTTGTCTTTATTAATTTAAAAACAGGCAAAGCCCTTCCGATTGAAGGCGAGATCCGCGATAAATTTGAACTGCTGACCGCGCCGGAGTAATTAGCCCGGCAGAACGAACAGATAATCCGCCCGGTCATTATGACCGGGCG