Orthogroup:group_2117


Homologs in group_2117

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15905 FBDBKF_15905 Morganella morganii S1 fadM Acyl-CoA thioesterase FadM
EHELCC_18505 EHELCC_18505 Morganella morganii S2 fadM Acyl-CoA thioesterase FadM
NLDBIP_17340 NLDBIP_17340 Morganella morganii S4 fadM Acyl-CoA thioesterase FadM
LHKJJB_17320 LHKJJB_17320 Morganella morganii S3 fadM Acyl-CoA thioesterase FadM
HKOGLL_17075 HKOGLL_17075 Morganella morganii S5 fadM Acyl-CoA thioesterase FadM
F4V73_RS16405 F4V73_RS16405 Morganella psychrotolerans - thioesterase family protein
PMI_RS00585 PMI_RS00585 Proteus mirabilis HI4320 - thioesterase family protein

Distribution of group_2117 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2117 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2117

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2117.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fadM 5
2 - 2

Product

# Product Occurence
1 Acyl-CoA thioesterase FadM 5
2 thioesterase family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0824 7 I Lipid transport and metabolism (I) Acyl-CoA thioesterase FadM

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K12500 7 thioesterase III [EC:3.1.2.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13279 7 Thioesterase-like superfamily

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
1,4-dihydroxy-2-naphthoyl-CoA hydrolase 1
Acyl-CoA thioester hydrolase YbgC 4
Acyl-CoA thioesterase YbgC 1
Acyl-acyl carrier protein thioesterase ATL4, chloroplastic 1
Acyl-acyl carrier protein thioesterase TE3, chloroplastic 1
Long-chain acyl-CoA thioesterase FadM 1

Protein length

Min length 134
Max length 136
Mean length (sd) 135.6 (0.8)
Median length 136.0

Protein length distribution