Homologs in group_1042

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05890 FBDBKF_05890 96.3 Morganella morganii S1 metP ABC-type methionine transport system, permease component
EHELCC_08935 EHELCC_08935 96.3 Morganella morganii S2 metP ABC-type methionine transport system, permease component
NLDBIP_09315 NLDBIP_09315 96.3 Morganella morganii S4 metP ABC-type methionine transport system, permease component
LHKJJB_08440 LHKJJB_08440 96.3 Morganella morganii S3 metP ABC-type methionine transport system, permease component
HKOGLL_07990 HKOGLL_07990 96.3 Morganella morganii S5 metP ABC-type methionine transport system, permease component
PMI_RS11160 PMI_RS11160 82.5 Proteus mirabilis HI4320 - methionine ABC transporter permease MetI

Distribution of the homologs in the orthogroup group_1042

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1042

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZRN0 1.76e-114 328 84 0 217 3 metI D-methionine transport system permease protein MetI Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z991 8.9e-114 327 84 0 217 3 metI D-methionine transport system permease protein MetI Salmonella typhi
P31547 7.43e-111 319 82 0 217 1 metI D-methionine transport system permease protein MetI Escherichia coli (strain K12)
Q8X800 9.25e-111 319 82 0 217 3 metI D-methionine transport system permease protein MetI Escherichia coli O157:H7
Q8ZH39 1.75e-110 318 80 0 217 3 metI D-methionine transport system permease protein MetI Yersinia pestis
Q9KTJ6 4.14e-68 211 52 0 210 3 metI Probable D-methionine transport system permease protein MetI Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P46492 1.29e-52 171 49 0 204 3 metI Probable D-methionine transport system permease protein MetI Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9CK96 3.15e-46 155 48 2 204 3 metI Probable D-methionine transport system permease protein MetI Pasteurella multocida (strain Pm70)
O32168 3.74e-44 150 44 0 180 1 metP Methionine import system permease protein MetP Bacillus subtilis (strain 168)
P48245 1.68e-09 59 25 3 215 1 gluD Glutamate transport system permease protein GluD Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q8RQL4 3.52e-09 58 25 4 208 3 gluD Glutamate transport system permease protein GluD Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
Q9KHT8 3.02e-08 55 25 3 161 1 opuCB Carnitine transport permease protein OpuCB Listeria monocytogenes
G2JZ43 3.02e-08 55 25 3 161 1 opuCB Carnitine transport permease protein OpuCB Listeria monocytogenes serotype 1/2a (strain 10403S)
Q45461 3.7e-08 55 27 6 206 2 opuBB Choline transport system permease protein OpuBB Bacillus subtilis (strain 168)
P0A2I7 1.61e-07 53 25 6 232 1 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2I8 1.61e-07 53 25 6 232 3 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Salmonella typhi
P33361 3.3e-07 53 25 2 174 1 yehY Glycine betaine uptake system permease protein YehY Escherichia coli (strain K12)
P54953 4.3e-07 52 27 5 179 1 yxeN Probable amino-acid permease protein YxeN Bacillus subtilis (strain 168)
Q8ZPK1 5e-07 52 28 4 161 1 osmY Osmoprotectant import permease protein OsmY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P17327 5.26e-07 52 29 3 147 2 proW Glycine betaine/proline betaine transport system permease protein ProW Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P14176 6.16e-07 52 29 3 147 1 proW Glycine betaine/proline betaine transport system permease protein ProW Escherichia coli (strain K12)
E0SCY2 1.02e-06 52 26 4 169 1 ousW Glycine betaine/choline transport system permease protein OusW Dickeya dadantii (strain 3937)
A0QQ68 1.32e-06 51 26 2 153 1 phnE Phosphate-import permease protein PhnE Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
P54536 1.34e-06 50 25 2 174 1 artQ Arginine transport system permease protein ArtQ Bacillus subtilis (strain 168)
O34742 3.28e-06 49 27 3 147 1 opuCD Glycine betaine/carnitine/choline transport system permease protein OpuCD Bacillus subtilis (strain 168)
P46340 6.22e-06 49 26 1 139 3 yqgI Probable ABC transporter permease protein YqgI Bacillus subtilis (strain 168)
Q9KHT6 8.99e-06 48 27 4 162 1 opuCD Carnitine transport permease protein OpuCD Listeria monocytogenes
G2JZ41 8.99e-06 48 27 4 162 1 opuCD Carnitine transport permease protein OpuCD Listeria monocytogenes serotype 1/2a (strain 10403S)
O69062 1.33e-05 48 29 4 155 3 htxC Putative phosphite transport system permease protein HtxC Stutzerimonas stutzeri
P0AEU6 1.7e-05 47 28 4 148 3 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Shigella flexneri
P0AEU3 1.7e-05 47 28 4 148 1 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Escherichia coli (strain K12)
P0AEU4 1.7e-05 47 28 4 148 3 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEU5 1.7e-05 47 28 4 148 3 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Escherichia coli O157:H7
P39775 1.81e-05 47 27 3 147 2 opuBD Choline transport system permease protein OpuBD Bacillus subtilis (strain 168)
Q8Y775 2.94e-05 47 29 4 161 1 egtUBC Probable ergothioneine transporter EgtUBC Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
P46339 2.97e-05 47 31 2 134 3 yqgH Probable ABC transporter permease protein YqgH Bacillus subtilis (strain 168)
Q9RR45 3.82e-05 47 22 4 174 1 gbuB Glycine betaine/carnitine transport permease protein GbuB Listeria monocytogenes serotype 1/2a (strain 10403S)
P9WG09 4.9e-05 46 33 0 74 1 pstA2 Phosphate transport system permease protein PstA 2 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WG08 4.9e-05 46 33 0 74 3 pstA2 Phosphate transport system permease protein PstA 2 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A627 4.9e-05 46 33 0 74 3 pstA2 Phosphate transport system permease protein PstA 2 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P46921 5.25e-05 46 25 5 182 1 opuAB Glycine betaine transport system permease protein OpuAB Bacillus subtilis (strain 168)
O34606 7.77e-05 45 26 3 164 2 glnP Probable glutamine ABC transporter permease protein GlnP Bacillus subtilis (strain 168)
P42399 0.000104 45 28 6 171 3 yckA Probable amino-acid ABC transporter permease protein YckA Bacillus subtilis (strain 168)
O34878 0.000113 45 25 3 171 1 opuCB Glycine betaine/carnitine/choline transport system permease protein OpuCB Bacillus subtilis (strain 168)
Q52814 0.000137 45 23 4 159 3 aapM General L-amino acid transport system permease protein AapM Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
A0A0H2XK79 0.000149 45 26 3 161 3 egtUBC Probable ergothioneine transporter EgtUBC Staphylococcus aureus (strain USA300)
P0AER5 0.000251 44 29 3 96 1 gltK Glutamate/aspartate import permease protein GltK Escherichia coli (strain K12)
P0AER6 0.000251 44 29 3 96 3 gltK Glutamate/aspartate import permease protein GltK Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AER7 0.000251 44 29 3 96 3 gltK Glutamate/aspartate import permease protein GltK Escherichia coli O157:H7
Q52665 0.000346 44 30 6 147 3 bztC Glutamate/glutamine/aspartate/asparagine transport system permease protein BztC Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P72296 0.000405 43 32 4 106 3 occM Octopine transport system permease protein OccM Rhizobium meliloti
O69053 0.000414 43 27 2 117 3 ptxC Phosphite transport system permease protein PtxC Stutzerimonas stutzeri
P41032 0.000576 43 37 0 58 3 cysU Sulfate transport system permease protein CysT Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q52813 0.000605 43 25 2 135 3 aapQ General L-amino acid transport system permease protein AapQ Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
P35114 0.000671 43 31 2 87 2 occM Octopine transport system permease protein OccM Rhizobium radiobacter
P35118 0.000756 42 30 5 129 3 nocQ Nopaline transport system permease protein NocQ Agrobacterium fabrum (strain C58 / ATCC 33970)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16005
Feature type CDS
Gene -
Product methionine ABC transporter permease MetI
Location 210748 - 211401 (strand: -1)
Length 654 (nucleotides) / 217 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1042
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00528 Binding-protein-dependent transport system inner membrane component

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2011 Amino acid transport and metabolism (E) E ABC-type methionine transport system, permease component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02072 D-methionine transport system permease protein ABC transporters -

Protein Sequence

MSEGMILLLVKGIWETLVMTFSSGFLGFLIGLPVGVLLYITRSGQIADNKSLYHTLSTLVNIFRAIPFIILLVWMIPFTRIIIGTSIGLEAAIVPLTVGAAPFIARMVENALLEIPSGLIEASRAMGATPLQIVRKILLPEALPGLINAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYVGYNAVVMNTVLALLVVLVFIIQVCGDRLVKAVTHK

Flanking regions ( +/- flanking 50bp)

GGCAATCGCCTTCCTGAAAGAACACCATGTCAAAGCAGAGGTTCTCGGTTATGTCTGAAGGAATGATTTTACTGTTAGTTAAAGGCATATGGGAAACACTGGTGATGACATTTTCATCGGGCTTTCTCGGGTTTCTGATCGGCCTGCCGGTCGGTGTACTGTTATATATCACGCGTTCCGGACAGATTGCAGACAATAAGAGTCTGTATCATACCCTGTCAACACTGGTGAATATTTTCCGGGCCATCCCGTTCATTATTTTACTGGTGTGGATGATCCCGTTTACCCGGATAATCATCGGTACGTCTATCGGGTTAGAAGCGGCGATTGTACCGCTGACAGTCGGTGCGGCGCCGTTTATTGCCCGCATGGTGGAGAATGCATTATTAGAGATCCCGTCAGGGCTGATTGAAGCTTCCCGTGCAATGGGTGCAACGCCGTTACAAATCGTCAGAAAGATTTTACTGCCGGAAGCGTTACCCGGACTGATTAACGCCGCAACCATTACCCTGATAACACTTGTGGGTTACTCCGCAATGGGGGGCGCTGTCGGTGCAGGCGGACTGGGACAAATAGGGTATCAGTACGGTTATGTCGGTTATAACGCAGTAGTAATGAATACGGTATTAGCATTATTAGTTGTTTTGGTCTTTATTATTCAGGTATGTGGTGACCGTTTAGTTAAAGCTGTTACACACAAGTAAGCGTCTCTTTGCGCCGCACAAACTGCGGATGCACCTTAAACAGAACGAGG