Homologs in group_1042

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05890 FBDBKF_05890 83.9 Morganella morganii S1 metP ABC-type methionine transport system, permease component
EHELCC_08935 EHELCC_08935 83.9 Morganella morganii S2 metP ABC-type methionine transport system, permease component
NLDBIP_09315 NLDBIP_09315 83.9 Morganella morganii S4 metP ABC-type methionine transport system, permease component
LHKJJB_08440 LHKJJB_08440 83.9 Morganella morganii S3 metP ABC-type methionine transport system, permease component
HKOGLL_07990 HKOGLL_07990 83.9 Morganella morganii S5 metP ABC-type methionine transport system, permease component
F4V73_RS16005 F4V73_RS16005 82.5 Morganella psychrotolerans - methionine ABC transporter permease MetI

Distribution of the homologs in the orthogroup group_1042

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1042

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZRN0 1.42e-111 321 82 0 217 3 metI D-methionine transport system permease protein MetI Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P31547 1.73e-111 321 83 0 217 1 metI D-methionine transport system permease protein MetI Escherichia coli (strain K12)
Q8X800 2.18e-111 320 82 0 217 3 metI D-methionine transport system permease protein MetI Escherichia coli O157:H7
Q8ZH39 4.64e-111 320 82 0 217 3 metI D-methionine transport system permease protein MetI Yersinia pestis
Q8Z991 6.59e-111 319 81 0 217 3 metI D-methionine transport system permease protein MetI Salmonella typhi
Q9KTJ6 2e-71 219 52 0 210 3 metI Probable D-methionine transport system permease protein MetI Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P46492 3.26e-48 160 43 0 207 3 metI Probable D-methionine transport system permease protein MetI Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9CK96 2.91e-47 157 49 2 209 3 metI Probable D-methionine transport system permease protein MetI Pasteurella multocida (strain Pm70)
O32168 3.55e-47 157 48 0 180 1 metP Methionine import system permease protein MetP Bacillus subtilis (strain 168)
P14176 2.81e-09 59 33 4 151 1 proW Glycine betaine/proline betaine transport system permease protein ProW Escherichia coli (strain K12)
P17327 6.4e-09 58 32 4 151 2 proW Glycine betaine/proline betaine transport system permease protein ProW Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O69062 4.48e-08 55 26 5 205 3 htxC Putative phosphite transport system permease protein HtxC Stutzerimonas stutzeri
P54536 7.42e-08 54 26 5 205 1 artQ Arginine transport system permease protein ArtQ Bacillus subtilis (strain 168)
P33361 1.19e-07 54 27 6 209 1 yehY Glycine betaine uptake system permease protein YehY Escherichia coli (strain K12)
O34742 1.24e-07 53 27 4 166 1 opuCD Glycine betaine/carnitine/choline transport system permease protein OpuCD Bacillus subtilis (strain 168)
E0SCY2 1.25e-07 54 28 5 168 1 ousW Glycine betaine/choline transport system permease protein OusW Dickeya dadantii (strain 3937)
Q9KHT8 6.07e-07 51 24 3 161 1 opuCB Carnitine transport permease protein OpuCB Listeria monocytogenes
G2JZ43 6.07e-07 51 24 3 161 1 opuCB Carnitine transport permease protein OpuCB Listeria monocytogenes serotype 1/2a (strain 10403S)
Q45461 1.04e-06 51 25 4 172 2 opuBB Choline transport system permease protein OpuBB Bacillus subtilis (strain 168)
A0QQ68 2.21e-06 51 26 2 164 1 phnE Phosphate-import permease protein PhnE Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
P0AER5 3.65e-06 49 29 4 127 1 gltK Glutamate/aspartate import permease protein GltK Escherichia coli (strain K12)
P0AER6 3.65e-06 49 29 4 127 3 gltK Glutamate/aspartate import permease protein GltK Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AER7 3.65e-06 49 29 4 127 3 gltK Glutamate/aspartate import permease protein GltK Escherichia coli O157:H7
P48245 4.53e-06 49 23 4 215 1 gluD Glutamate transport system permease protein GluD Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P39775 5.97e-06 48 28 4 163 2 opuBD Choline transport system permease protein OpuBD Bacillus subtilis (strain 168)
Q8ZPK1 7.23e-06 48 27 4 161 1 osmY Osmoprotectant import permease protein OsmY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8RQL4 8.72e-06 48 24 5 208 3 gluD Glutamate transport system permease protein GluD Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
Q9KHT6 1.62e-05 47 27 6 174 1 opuCD Carnitine transport permease protein OpuCD Listeria monocytogenes
G2JZ41 1.62e-05 47 27 6 174 1 opuCD Carnitine transport permease protein OpuCD Listeria monocytogenes serotype 1/2a (strain 10403S)
A0A0H2XK79 1.7e-05 48 28 3 162 3 egtUBC Probable ergothioneine transporter EgtUBC Staphylococcus aureus (strain USA300)
Q8Y775 2.11e-05 48 30 5 161 1 egtUBC Probable ergothioneine transporter EgtUBC Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
P45023 3.26e-05 46 23 7 216 3 HI_1079 Probable amino-acid ABC transporter permease protein HI_0179 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P46921 6.04e-05 46 27 7 181 1 opuAB Glycine betaine transport system permease protein OpuAB Bacillus subtilis (strain 168)
P54953 6.81e-05 45 24 3 157 1 yxeN Probable amino-acid permease protein YxeN Bacillus subtilis (strain 168)
P46340 6.99e-05 46 26 1 139 3 yqgI Probable ABC transporter permease protein YqgI Bacillus subtilis (strain 168)
O34878 9.07e-05 45 25 4 171 1 opuCB Glycine betaine/carnitine/choline transport system permease protein OpuCB Bacillus subtilis (strain 168)
A0A140NFA3 9.87e-05 45 24 2 160 3 phnE Phosphonate transport system permease protein PhnE Escherichia coli (strain B / BL21-DE3)
O34606 0.000137 45 24 4 164 2 glnP Probable glutamine ABC transporter permease protein GlnP Bacillus subtilis (strain 168)
O34671 0.00019 44 26 4 161 2 glnM Probable glutamine ABC transporter permease protein GlnM Bacillus subtilis (strain 168)
O69053 0.000253 44 25 1 121 3 ptxC Phosphite transport system permease protein PtxC Stutzerimonas stutzeri
P46339 0.000302 44 29 4 143 3 yqgH Probable ABC transporter permease protein YqgH Bacillus subtilis (strain 168)
Q9RR45 0.000302 44 26 4 160 1 gbuB Glycine betaine/carnitine transport permease protein GbuB Listeria monocytogenes serotype 1/2a (strain 10403S)
P55660 0.000354 43 20 5 219 3 NGR_a01530 Probable amino-acid ABC transporter permease protein y4tF Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P42399 0.000845 42 26 7 172 3 yckA Probable amino-acid ABC transporter permease protein YckA Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11160
Feature type CDS
Gene -
Product methionine ABC transporter permease MetI
Location 2456239 - 2456892 (strand: 1)
Length 654 (nucleotides) / 217 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1042
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00528 Binding-protein-dependent transport system inner membrane component

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2011 Amino acid transport and metabolism (E) E ABC-type methionine transport system, permease component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02072 D-methionine transport system permease protein ABC transporters -

Protein Sequence

MSEGMIYLLISGIWETLVMTFVSGFFGFVIGLPLGVLLYVTRPEQIMANSPAYKVISALVNIFRAIPFIILLVWMIPFTRMVVGTSIGLQAAIVPLTVGAAPFIARMVENTLLEIPHGLIEASRAMGATPMQIIKKVLLPESLPGLINAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYVGYNATVMNTVIVLLVILVFIIQFIGDRLVKLTTHK

Flanking regions ( +/- flanking 50bp)

GTCTATCGCGTTTTTAGAAGAGCATCATGTGAAAGTAGAGGTTCTCGGTTATGTCTGAAGGAATGATTTATTTATTAATTAGTGGGATCTGGGAAACCTTAGTCATGACATTTGTCTCAGGCTTTTTTGGTTTTGTCATTGGATTACCATTAGGTGTCTTACTTTATGTGACTCGTCCAGAGCAAATTATGGCGAACTCCCCCGCTTATAAAGTGATTTCTGCTTTAGTTAATATTTTTAGGGCCATCCCTTTTATTATCTTATTAGTTTGGATGATCCCTTTTACACGTATGGTAGTAGGAACATCCATTGGTTTACAGGCGGCTATCGTTCCGTTAACTGTAGGAGCTGCACCTTTTATTGCACGTATGGTAGAAAATACCTTATTAGAAATACCTCATGGTTTAATTGAAGCTTCTCGTGCCATGGGGGCAACACCAATGCAGATAATCAAGAAAGTTTTATTACCAGAATCTTTACCAGGTTTAATTAATGCTGCGACCATTACACTCATTACATTAGTCGGTTATTCCGCAATGGGGGGCGCTGTGGGTGCCGGTGGTTTAGGTCAAATTGGTTATCAGTATGGTTATGTGGGCTATAATGCCACAGTAATGAATACCGTCATTGTACTACTTGTTATTCTTGTTTTTATCATTCAGTTTATTGGCGATCGTTTAGTTAAACTGACAACACATAAATAAATGAATTAAAGGTTTCTATTCATCTACTATCTAATCAATAAATGTAGTTT