Orthogroup:group_1109


Homologs in group_1109

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06320 FBDBKF_06320 Morganella morganii S1 cpdA 3',5'-cyclic-AMP phosphodiesterase
EHELCC_09365 EHELCC_09365 Morganella morganii S2 cpdA 3',5'-cyclic-AMP phosphodiesterase
NLDBIP_09745 NLDBIP_09745 Morganella morganii S4 cpdA 3',5'-cyclic-AMP phosphodiesterase
LHKJJB_08010 LHKJJB_08010 Morganella morganii S3 cpdA 3',5'-cyclic-AMP phosphodiesterase
HKOGLL_07560 HKOGLL_07560 Morganella morganii S5 cpdA 3',5'-cyclic-AMP phosphodiesterase
F4V73_RS15600 F4V73_RS15600 Morganella psychrotolerans cpdA 3',5'-cyclic-AMP phosphodiesterase
PMI_RS11610 PMI_RS11610 Proteus mirabilis HI4320 cpdA 3',5'-cyclic-AMP phosphodiesterase

Distribution of group_1109 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1109 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1109

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1109.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cpdA 7

Product

# Product Occurence
1 3',5'-cyclic-AMP phosphodiesterase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1409 7 T Signal transduction mechanisms (T) 3',5'-cyclic AMP phosphodiesterase CpdA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03651 7 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] Purine metabolism
Metabolic pathways
Biofilm formation - Pseudomonas aeruginosa		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00149 7 Calcineurin-like phosphoesterase

Annotations of the 27 SwissProt hits

Annotation Number of occurrences
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 5
3',5'-cyclic-nucleotide phosphodiesterase alr5338 1
Glycerophosphodiester phosphodiesterase GpdQ 2
Probable cyclic nucleotide phosphodiesterase CBUA0032 1
Probable cyclic nucleotide phosphodiesterase COSY_0614 1
Probable cyclic nucleotide phosphodiesterase CPS_4178 1
Probable cyclic nucleotide phosphodiesterase Fisuc_1441/FSU_1912 1
Probable cyclic nucleotide phosphodiesterase MCR_0369 1
Probable cyclic nucleotide phosphodiesterase PSM_A2567 1
Probable cyclic nucleotide phosphodiesterase PsycPRwf_0181 1
Probable cyclic nucleotide phosphodiesterase Psyc_2036 1
Probable cyclic nucleotide phosphodiesterase RER_40650 1
Probable cyclic nucleotide phosphodiesterase RPA0124 1
Probable cyclic nucleotide phosphodiesterase Rmag_0669 1
Probable cyclic nucleotide phosphodiesterase SYNW0868 1
Probable cyclic nucleotide phosphodiesterase SynWH7803_1390 1
Probable cyclic nucleotide phosphodiesterase XBJ1_0953 1
Probable cyclic nucleotide phosphodiesterase syc0937_d 1
Probable glycerophosphodiester phosphodiesterase GpdQ 2
cAMP/cGMP dual specificity phosphodiesterase MT0825 1
cAMP/cGMP dual specificity phosphodiesterase Rv0805 1

Protein length

Min length 277
Max length 279
Mean length (sd) 277.3 (0.8)
Median length 277.0

Protein length distribution