Homologs in group_3003

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17600 FBDBKF_17600 88.5 Morganella morganii S1 metC Cystathionine beta-lyase/cystathionine gamma-synthase
EHELCC_18085 EHELCC_18085 88.5 Morganella morganii S2 metC Cystathionine beta-lyase/cystathionine gamma-synthase
NLDBIP_18065 NLDBIP_18065 88.5 Morganella morganii S4 metC Cystathionine beta-lyase/cystathionine gamma-synthase
LHKJJB_18260 LHKJJB_18260 88.5 Morganella morganii S3 metC Cystathionine beta-lyase/cystathionine gamma-synthase
HKOGLL_17940 HKOGLL_17940 88.5 Morganella morganii S5 metC Cystathionine beta-lyase/cystathionine gamma-synthase

Distribution of the homologs in the orthogroup group_3003

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3003

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O05394 4.43e-80 253 39 4 339 1 mccB Cystathionine gamma-lyase Bacillus subtilis (strain 168)
A2RM21 4.95e-78 248 39 4 340 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris (strain MG1363)
P0A4K2 4.95e-78 248 39 4 340 3 metC Cystathionine beta-lyase Lactococcus lactis subsp. lactis (strain IL1403)
P13254 1.52e-74 240 37 2 337 1 mdeA L-methionine gamma-lyase Pseudomonas putida
A0A0J6G7P5 1.41e-73 237 36 5 368 3 megL L-methionine gamma-lyase Pseudomonas deceptionensis
P0C2T9 3.88e-73 236 38 4 340 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris
Q8RDT4 5.67e-73 236 35 3 341 1 FN1419 L-methionine gamma-lyase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
Q8L0X4 1.2e-72 235 34 3 341 1 mgl L-methionine gamma-lyase Fusobacterium nucleatum subsp. polymorphum
P56069 3.11e-72 233 37 4 338 1 metB Cystathionine gamma-synthase Helicobacter pylori (strain ATCC 700392 / 26695)
Q1M0P5 6.32e-72 233 37 4 338 1 metB Cystathionine gamma-synthase Helicobacter pylori
Q7MX71 5.37e-70 228 36 3 341 1 mgl L-methionine gamma-lyase Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
Q9ZMW7 7.33e-70 227 36 4 338 3 metB Cystathionine gamma-synthase Helicobacter pylori (strain J99 / ATCC 700824)
Q73KL7 4.42e-68 223 33 3 342 1 megL L-methionine gamma-lyase Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
Q83A83 6.94e-67 219 32 7 385 1 metC Cystathionine beta-lyase Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
P9WGB7 2.16e-65 216 34 3 341 1 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB6 2.16e-65 216 34 3 341 3 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66876 2.16e-65 216 34 3 341 3 metB Cystathionine gamma-synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P46807 2.21e-65 216 34 3 341 3 metB Cystathionine gamma-synthase Mycobacterium leprae (strain TN)
P0DXD3 8.06e-65 214 37 5 345 1 Rleg2_5066 Canavanine gamma-lyase Rhizobium leguminosarum bv. trifolii (strain WSM2304)
O31631 1.49e-64 213 35 6 365 1 metI Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase Bacillus subtilis (strain 168)
Q4L332 2.53e-64 213 36 6 353 1 metC Cystathionine beta-lyase MetC Staphylococcus haemolyticus (strain JCSC1435)
P55218 3.02e-64 213 34 3 383 1 metZ O-succinylhomoserine sulfhydrylase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O31632 3.22e-64 213 35 5 345 1 metC Cystathionine beta-lyase MetC Bacillus subtilis (strain 168)
P55217 4.32e-64 217 35 2 339 1 CGS1 Cystathionine gamma-synthase 1, chloroplastic Arabidopsis thaliana
P24601 6.72e-64 210 35 4 302 3 metB Probable cystathionine gamma-synthase (Fragment) Herpetosiphon aurantiacus
Q60HG7 2.13e-63 211 34 5 340 2 CTH Cystathionine gamma-lyase Macaca fascicularis
P0DXC4 3.11e-63 211 35 5 341 1 JFQ02_10020 Canavanine gamma-lyase Pseudomonas canavaninivorans
Q19QT7 6.79e-63 210 33 7 384 2 CTH Cystathionine gamma-lyase Sus scrofa
Q9C876 1.92e-62 209 34 4 364 3 CGS2 Probable cystathionine gamma-synthase 2 Arabidopsis thaliana
Q8VCN5 6.56e-62 207 32 7 384 1 Cth Cystathionine gamma-lyase Mus musculus
P18757 5.34e-61 204 32 6 384 1 Cth Cystathionine gamma-lyase Rattus norvegicus
Q55DV9 1.92e-60 203 33 3 340 1 cysA Cystathionine gamma-lyase Dictyostelium discoideum
P55216 2.95e-60 202 35 5 343 3 cth-2 Putative cystathionine gamma-lyase 2 Caenorhabditis elegans
P44502 6.59e-60 201 34 7 366 3 metB Cystathionine gamma-synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q58DW2 2.55e-59 201 33 4 324 2 CTH Cystathionine gamma-lyase Bos taurus
Q9WZY4 1.28e-58 199 31 6 397 1 TM_0882 O-acetyl-L-homoserine sulfhydrylase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P53780 1.37e-58 200 34 5 347 1 At3g57050 Cystathionine beta-lyase, chloroplastic Arabidopsis thaliana
P32929 1.49e-58 198 35 5 340 1 CTH Cystathionine gamma-lyase Homo sapiens
P31373 1.82e-57 195 34 8 351 1 CYS3 Cystathionine gamma-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q5SK88 4.79e-57 195 30 8 424 1 oah1 O-acetyl-L-homoserine sulfhydrylase 1 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
A0A0M3VI47 7.56e-57 195 33 4 341 1 CBL Cystathionine beta-lyase, chloroplastic Mimosa pudica
P94890 7.67e-56 192 28 7 430 1 metY O-acetyl-L-homoserine sulfhydrylase Leptospira meyeri
O13326 2.12e-54 188 29 6 404 1 met17 Homocysteine synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
U6BYK3 7.64e-54 187 30 6 368 1 None Mimosinase, chloroplastic Mimosa pudica
A8CEI3 4.07e-53 185 30 6 366 1 None Mimosinase, chloroplastic Leucaena leucocephala
P00935 1.96e-52 182 33 2 342 1 metB Cystathionine gamma-synthase Escherichia coli (strain K12)
P50125 7.55e-50 176 29 6 398 1 cysD Homocysteine synthase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q79VI4 2.65e-49 175 28 3 368 1 metY O-acetyl-L-homoserine sulfhydrylase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
S0DUX5 3.15e-48 172 28 6 400 1 FUB7 Sulfhydrylase FUB7 Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831)
A0A0D2YG02 1.06e-47 171 28 6 400 1 FUB7 Sulfhydrylase FUB7 Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936)
Q9X0Z7 1.08e-47 169 30 11 394 1 aar L-alanine/L-glutamate racemase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
W7MS09 1.73e-47 170 28 6 400 1 FUB7 Sulfhydrylase FUB7 Gibberella moniliformis (strain M3125 / FGSC 7600)
Q1K8G0 2.86e-47 170 31 6 346 1 met-2 Cystathionine beta-lyase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q52811 3.01e-47 169 32 4 343 3 metC Putative cystathionine beta-lyase Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
P9WGB5 1.06e-44 162 29 6 392 1 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB4 1.06e-44 162 29 6 392 3 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q59829 3.78e-44 160 32 8 354 3 cysA Putative cystathionine gamma-lyase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q5SJ58 1.82e-43 159 30 9 394 1 oah2 O-acetyl-L-homoserine sulfhydrylase 2 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
O94350 4.19e-43 157 30 5 342 3 str3 Cystathionine beta-lyase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q92441 7.6e-43 158 27 8 432 3 MET17 Homocysteine/cysteine synthase Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Q07703 8.69e-43 157 29 6 357 1 metC Cystathionine beta-lyase Bordetella avium
Q826W3 1.86e-42 156 33 7 343 1 mgl L-methionine gamma-lyase Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
Q5MNH8 3.72e-41 154 26 6 416 2 lolC2 Sulfhydrylase-like protein lolC2 Epichloe uncinata
P06721 1.68e-39 148 28 5 341 1 metC Cystathionine beta-lyase MetC Escherichia coli (strain K12)
P06106 1.83e-39 149 26 7 410 1 MET17 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q8J0B2 6.8e-39 148 26 6 417 2 lolC1 Sulfhydrylase-like protein lolC1 Epichloe uncinata
Q9SGU9 8.78e-39 147 31 10 337 1 MGL Methionine gamma-lyase Arabidopsis thaliana
P18949 8.52e-38 143 28 5 340 3 metC Cystathionine beta-lyase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44527 1.4e-34 135 27 5 347 3 metC Cystathionine beta-lyase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q73GL9 2.76e-34 134 25 10 400 1 aar L-alanine/L-glutamate racemase Wolbachia pipientis wMel
P43623 2.51e-30 122 30 2 243 1 IRC7 Putative cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P38716 3.47e-27 114 28 9 341 1 YHR112C Uncharacterized trans-sulfuration enzyme YHR112C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P53101 9.12e-23 102 27 13 367 1 STR3 Cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O42851 1.23e-21 99 29 16 387 1 SPAC23A1.14c Uncharacterized trans-sulfuration enzyme C23A1.14c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P38675 6.11e-13 73 28 5 247 3 met-7 Cystathionine gamma-synthase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
A0A2V5GUR2 9.11e-11 67 26 10 291 1 ungC Alanine racemase ungC Aspergillus violaceofuscus (strain CBS 115571)
A0A397HQN2 1.91e-10 65 25 9 336 1 ankD Cystathionine gamma-synthase-like protein ankD Aspergillus thermomutatus
A0A0C2WKN7 5.08e-10 64 24 15 383 2 iboG1 Cystathionine gamma-synthase-like enzyme iboG1 Amanita muscaria (strain Koide BX008)
G8XHD7 1.36e-09 63 29 15 301 1 besB L-2-amino-4-chloropent-4-enoate dechlorinase/desaturase Streptantibioticus cattleyicolor (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
P47164 1.3e-08 60 28 12 254 1 STR2 Cystathionine gamma-synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O74314 1.69e-08 60 25 7 252 3 SPBC15D4.09c Probable cystathionine gamma-synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A0A2I1D2M7 6e-08 58 25 7 264 3 ungC' Alanine racemase ungC' Aspergillus campestris (strain IBT 28561)
Q12198 8.75e-07 54 24 13 351 1 HSU1 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A0A0C2S258 2.18e-05 50 27 2 136 2 iboG2 Cystathionine gamma-synthase-like enzyme iboG2 Amanita muscaria (strain Koide BX008)
Q04533 4.07e-05 49 24 6 253 1 YML082W Putative cystathionine gamma-synthase YML082W Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14980
Feature type CDS
Gene -
Product aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Location 234290 - 235462 (strand: 1)
Length 1173 (nucleotides) / 390 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3003
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF01053 Cys/Met metabolism PLP-dependent enzyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0626 Amino acid transport and metabolism (E) E Cystathionine beta-lyase/cystathionine gamma-synthase

Protein Sequence

MKERTQLLYSGEMDYPEGMYPDSPAIFPATAYAMRDTQHYYAVSSGNGEYQYNRTANPNRDSLSAAISMMEDGDVSAVMASGMAAISATLLSLLKQGDHLVVNESIYGETIELIDLILIPLGVTVTYADFLSPAAISAAIRPETVMFYTEIISNPLIKVIDIDAVSAISRKHQCLLVVDNTFSTPFVIKPLQHGADIVIHSLTKFFGGHSDLTAGSVTCSLALMQKIELKARLLGGCSDPYTAWLCLRSIRTMEMRVTRQMENAQAIAQALSRDPRVAQVNYPGLESHPQHTLADSLFIHGYGPMLSFRVRDEQPLVDVFIHRLELITYLGTLGGFRTSLAHPATAFRTEFTPQQLIDFGMHEGLIRISAGCEAAEDLIADITQALDVFN

Flanking regions ( +/- flanking 50bp)

AACTTGTCACTTTTATAACAGTGATGAGAAATGATTATTCAGGATAAATAATGAAAGAACGCACTCAACTTTTGTATTCAGGGGAAATGGATTATCCGGAAGGCATGTACCCGGATTCACCGGCAATATTTCCGGCAACAGCATACGCGATGCGCGATACGCAGCATTACTATGCTGTCAGCAGCGGGAATGGTGAATATCAATATAACCGCACAGCGAATCCGAATCGTGACAGCTTATCCGCTGCGATTTCAATGATGGAGGACGGTGACGTTTCTGCGGTCATGGCATCAGGCATGGCGGCGATTTCAGCGACACTGCTGAGCCTGCTGAAGCAGGGCGACCATCTTGTTGTTAATGAATCAATTTACGGCGAAACGATTGAGTTAATCGATCTGATCTTAATCCCGTTGGGGGTCACTGTGACCTACGCGGACTTTCTCTCTCCGGCAGCGATTTCGGCGGCGATACGTCCGGAAACTGTTATGTTTTATACCGAAATTATCAGCAATCCATTGATTAAAGTGATTGATATTGATGCTGTTTCGGCGATCAGCCGTAAACATCAGTGTTTGCTGGTGGTTGATAATACATTTTCAACTCCTTTTGTTATTAAACCACTGCAACATGGTGCGGATATTGTCATCCACAGTCTGACAAAATTTTTCGGCGGGCATAGTGATTTAACCGCAGGTTCAGTGACCTGTTCGCTGGCACTGATGCAGAAAATTGAACTGAAAGCCCGCCTGCTGGGCGGATGTAGTGATCCATACACGGCATGGCTTTGCCTGCGCAGTATCCGGACGATGGAAATGCGTGTTACCCGGCAGATGGAAAATGCGCAGGCTATCGCACAGGCACTCAGTCGTGACCCGCGTGTTGCGCAGGTTAACTACCCGGGGCTTGAGAGTCATCCACAGCATACACTGGCTGACTCACTGTTTATTCACGGATATGGTCCGATGCTCAGTTTCCGTGTGCGGGATGAACAGCCGTTGGTGGATGTATTTATTCACCGCCTGGAGCTGATCACTTACCTGGGAACATTGGGTGGATTCCGCACGTCACTGGCGCATCCGGCGACAGCATTCAGGACTGAATTTACCCCGCAGCAGCTTATTGATTTCGGCATGCATGAAGGATTGATTCGTATTTCTGCCGGCTGCGAAGCCGCTGAGGATTTAATTGCTGATATCACTCAGGCACTTGATGTATTTAATTAATTTCGGATACTCATTATGGACTCAATACTAAATATAATTAATCAGTTTTC