Homologs in group_2094

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15760 FBDBKF_15760 89.0 Morganella morganii S1 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
EHELCC_17675 EHELCC_17675 89.0 Morganella morganii S2 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
NLDBIP_19345 NLDBIP_19345 89.0 Morganella morganii S4 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
LHKJJB_18115 LHKJJB_18115 89.0 Morganella morganii S3 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
HKOGLL_18965 HKOGLL_18965 89.0 Morganella morganii S5 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
PMI_RS07405 PMI_RS07405 40.1 Proteus mirabilis HI4320 - LuxR C-terminal-related transcriptional regulator

Distribution of the homologs in the orthogroup group_2094

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2094

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AED6 6.39e-64 201 45 0 215 3 uvrY Response regulator UvrY Shigella flexneri
P0AED5 6.39e-64 201 45 0 215 1 uvrY Response regulator UvrY Escherichia coli (strain K12)
P66797 7.86e-64 201 45 0 215 3 uvrY Response regulator UvrY Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P66798 7.86e-64 201 45 0 215 3 uvrY Response regulator UvrY Escherichia coli O157:H7
Q51373 2.77e-49 163 38 2 211 3 gacA Response regulator GacA Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q52376 8.05e-48 160 37 0 210 3 gacA Response regulator GacA Pseudomonas syringae pv. syringae (strain B728a)
P95582 1.01e-47 159 37 0 210 3 gacA Response regulator GacA Pseudomonas viridiflava
P32967 1.5e-46 156 38 1 210 1 gacA Response regulator GacA Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)
O32197 2.39e-26 104 28 0 194 2 liaR Transcriptional regulatory protein LiaR Bacillus subtilis (strain 168)
Q8CN75 1.46e-25 102 29 4 221 3 nreC Oxygen regulatory protein NreC Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HLK6 2.02e-25 102 29 4 221 3 nreC Oxygen regulatory protein NreC Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q4L8Q6 2.15e-25 102 28 4 218 3 nreC Oxygen regulatory protein NreC Staphylococcus haemolyticus (strain JCSC1435)
Q6GE42 1.5e-24 100 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain MRSA252)
Q2YZ42 1.5e-24 100 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q7A029 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain MW2)
A8Z580 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain USA300 / TCH1516)
Q6G6T0 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain MSSA476)
Q7A3U5 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain N315)
Q99RN8 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain Mu50 / ATCC 700699)
A6QJN1 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain Newman)
Q5HDG5 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain COL)
A5IVH2 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain JH9)
Q2FVM7 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FEA6 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain USA300)
A6U4C0 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain JH1)
A7X623 3.14e-24 99 28 4 220 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain Mu3 / ATCC 700698)
Q7WZY4 8.09e-24 98 28 5 218 1 nreC Oxygen regulatory protein NreC Staphylococcus carnosus (strain TM300)
P0A4H2 2.03e-22 94 27 2 193 1 bvgA Virulence factors putative positive transcription regulator BvgA Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P0A4H4 2.03e-22 94 27 2 193 3 bvgA Virulence factors putative positive transcription regulator BvgA Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
P0A4H3 2.03e-22 94 27 2 193 3 bvgA Virulence factors putative positive transcription regulator BvgA Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P55184 6.82e-22 93 26 1 213 3 yxjL Uncharacterized transcriptional regulatory protein YxjL Bacillus subtilis (strain 168)
P13800 1.28e-21 92 24 4 228 1 degU Transcriptional regulatory protein DegU Bacillus subtilis (strain 168)
P9WMF9 1.46e-21 92 26 0 195 1 devR DNA-binding transcriptional activator DevR/DosR Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF8 1.46e-21 92 26 0 195 2 devR DNA-binding transcriptional activator DevR/DosR Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WGM5 5.83e-21 90 27 3 211 1 narL Probable transcriptional regulatory protein NarL Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGM4 5.83e-21 90 27 3 211 3 narL Probable transcriptional regulatory protein NarL Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P31802 1.59e-20 89 28 1 205 3 narP Nitrate/nitrite response regulator protein NarP Escherichia coli (strain K12)
A8R3S7 1.98e-20 89 23 1 214 2 exaE Transcriptional activator protein ExaE Pseudomonas putida
P54662 1.47e-19 87 21 3 228 3 degU Transcriptional regulatory protein DegU Brevibacillus brevis
Q7CQM5 3.24e-19 85 27 2 208 1 ssrB Response regulator SsrB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44845 3.34e-19 85 26 2 193 3 narP Nitrate/nitrite response regulator protein homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AEL8 3.38e-19 85 23 1 208 3 fimZ Fimbriae Z protein Escherichia coli (strain K12)
P0AEL9 3.38e-19 85 23 1 208 3 fimZ Fimbriae Z protein Escherichia coli O157:H7
P96686 6.23e-19 85 28 5 219 3 ydfI Transcriptional regulatory protein YdfI Bacillus subtilis (strain 168)
P26319 2.43e-18 83 24 3 210 3 fimZ Fimbriae Z protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P27667 3.63e-18 82 27 4 202 3 uhpA Transcriptional regulatory protein UhpA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O34723 6.1e-17 79 25 4 199 1 desR Transcriptional regulatory protein DesR Bacillus subtilis (strain 168)
P0AGA9 9.36e-16 76 25 4 201 3 uhpA Transcriptional regulatory protein UhpA Shigella flexneri
P0AGA6 9.36e-16 76 25 4 201 1 uhpA Transcriptional regulatory protein UhpA Escherichia coli (strain K12)
P0AGA7 9.36e-16 76 25 4 201 3 uhpA Transcriptional regulatory protein UhpA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AGA8 9.36e-16 76 25 4 201 3 uhpA Transcriptional regulatory protein UhpA Escherichia coli O157:H7
P24908 3.94e-15 74 28 1 185 1 PA0034 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q7A0I0 6.03e-15 74 22 2 210 3 vraR Response regulator protein VraR Staphylococcus aureus (strain MW2)
Q6G850 6.03e-15 74 22 2 210 3 vraR Response regulator protein VraR Staphylococcus aureus (strain MSSA476)
Q6GFH3 6.03e-15 74 22 2 210 3 vraR Response regulator protein VraR Staphylococcus aureus (strain MRSA252)
Q7A4R9 6.03e-15 74 22 2 210 1 vraR Response regulator protein VraR Staphylococcus aureus (strain N315)
Q7A2Q1 6.03e-15 74 22 2 210 1 vraR Response regulator protein VraR Staphylococcus aureus (strain Mu50 / ATCC 700699)
P0C0Z1 6.03e-15 74 22 2 210 3 vraR Response regulator protein VraR Staphylococcus aureus (strain Mu3 / ATCC 700698)
P29904 1.3e-13 70 25 3 208 4 moxX Methanol utilization control regulatory protein MoxX Paracoccus denitrificans
O07019 2.27e-13 69 24 2 210 3 yvfU Uncharacterized transcriptional regulatory protein YvfU Bacillus subtilis (strain 168)
P58664 2.4e-13 70 27 1 185 4 ygeK Uncharacterized response regulatory protein YgeK Escherichia coli O157:H7
P94439 4.29e-13 69 21 3 219 1 lnrK Transcriptional regulatory protein LnrK Bacillus subtilis (strain 168)
O07528 7.77e-13 68 22 4 214 3 yhcZ Uncharacterized transcriptional regulatory protein YhcZ Bacillus subtilis (strain 168)
Q1M7A0 6.8e-11 63 24 4 211 3 mctR Transcriptional regulatory protein MctR Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
P56644 2.09e-10 61 26 3 149 3 sgaR Probable transcriptional regulatory protein SgaR Hyphomicrobium methylovorum
P0ACZ7 7.71e-10 60 25 1 180 1 evgA DNA-binding transcriptional activator EvgA Shigella flexneri
P0ACZ4 7.71e-10 60 25 1 180 1 evgA DNA-binding transcriptional activator EvgA Escherichia coli (strain K12)
P0ACZ5 7.71e-10 60 25 1 180 3 evgA DNA-binding transcriptional activator EvgA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACZ6 7.71e-10 60 25 1 180 3 evgA DNA-binding transcriptional activator EvgA Escherichia coli O157:H7
Q46791 1.8e-09 58 26 1 151 1 ygeK Uncharacterized response regulatory protein YgeK Escherichia coli (strain K12)
Q5HEP0 3.77e-09 58 22 2 210 3 vraR Response regulator protein VraR Staphylococcus aureus (strain COL)
Q2FX09 3.77e-09 58 22 2 210 1 vraR Response regulator protein VraR Staphylococcus aureus (strain NCTC 8325 / PS 47)
P58663 9.06e-09 57 22 5 206 1 rcsB Transcriptional regulatory protein RcsB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P69410 1.01e-08 57 22 5 206 3 rcsB Transcriptional regulatory protein RcsB Shigella flexneri
P0DMC8 1.01e-08 57 22 5 206 1 rcsB Transcriptional regulatory protein RcsB Escherichia coli
P0DMC7 1.01e-08 57 22 5 206 1 rcsB Transcriptional regulatory protein RcsB Escherichia coli (strain K12)
P69408 1.01e-08 57 22 5 206 3 rcsB Transcriptional regulatory protein RcsB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P69409 1.01e-08 57 22 5 206 3 rcsB Transcriptional regulatory protein RcsB Escherichia coli O157:H7
Q56127 1.31e-08 57 22 5 206 3 rcsB Transcriptional regulatory protein RcsB Salmonella typhi
Q49YS9 2.27e-08 56 22 2 210 3 vraR Response regulator protein VraR Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q8CNP9 7.1e-08 54 22 2 210 3 vraR Response regulator protein VraR Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HN50 7.1e-08 54 22 2 210 3 vraR Response regulator protein VraR Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q4L7J5 8.38e-08 54 22 2 210 3 vraR Response regulator protein VraR Staphylococcus haemolyticus (strain JCSC1435)
Q8KR08 8.45e-08 54 25 1 144 1 tmoT Response regulator protein TmoT Pseudomonas mendocina
P26487 2.03e-07 53 23 2 168 3 fixJ Transcriptional regulatory protein FixJ Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
P29369 2.37e-07 53 22 3 205 3 agmR Glycerol metabolism activator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0AF31 2.97e-07 53 22 2 185 3 narL Nitrate/nitrite response regulator protein NarL Shigella flexneri
P0AF28 2.97e-07 53 22 2 185 1 narL Nitrate/nitrite response regulator protein NarL Escherichia coli (strain K12)
P0AF29 2.97e-07 53 22 2 185 3 narL Nitrate/nitrite response regulator protein NarL Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AF30 2.97e-07 53 22 2 185 3 narL Nitrate/nitrite response regulator protein NarL Escherichia coli O157:H7
P15940 8.56e-07 51 25 2 142 3 nodW Nodulation protein W Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
Q9WYN9 4.29e-06 50 31 3 108 1 cheB Protein-glutamate methylesterase/protein-glutamine glutaminase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q3LWR6 6.51e-06 49 25 2 144 3 todT Response regulator protein TodT Pseudomonas putida
I7CA98 6.51e-06 49 25 2 144 1 todT Response regulator protein TodT Pseudomonas putida (strain DOT-T1E)
A5W4E2 6.51e-06 49 25 2 144 1 todT Response regulator protein TodT Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
Q8TLG9 9.94e-06 49 24 3 144 3 cheB1 Protein-glutamate methylesterase/protein-glutamine glutaminase 1 Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
O58192 1.04e-05 49 29 1 106 3 cheB Protein-glutamate methylesterase/protein-glutamine glutaminase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q9UYF3 1.38e-05 48 30 2 107 3 cheB Protein-glutamate methylesterase/protein-glutamine glutaminase Pyrococcus abyssi (strain GE5 / Orsay)
P10958 3.62e-05 46 21 1 168 1 fixJ Transcriptional regulatory protein FixJ Rhizobium meliloti (strain 1021)
Q8Q009 3.7e-05 47 23 2 146 3 cheB1 Protein-glutamate methylesterase/protein-glutamine glutaminase 1 Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
Q5QZQ3 3.75e-05 47 30 3 105 3 cheB Protein-glutamate methylesterase/protein-glutamine glutaminase Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
P72781 4.02e-05 47 22 5 229 1 rre1 Response regulator Rre1 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q56312 5.39e-05 45 24 3 119 1 cheY Chemotaxis protein CheY Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P45671 6.42e-05 47 26 0 75 3 ntrC DNA-binding transcriptional regulator NtrC Azospirillum brasilense
O87940 8.33e-05 45 25 2 158 1 tdiR Transcriptional regulatory protein TdiR Thauera aromatica
Q5V0B3 8.77e-05 46 28 4 106 1 cheB Protein-glutamate methylesterase/protein-glutamine glutaminase Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
A8R3T0 9.13e-05 45 22 2 205 3 agmR Glycerol metabolism activator Pseudomonas putida
P62637 0.000109 46 26 2 113 3 cheB2 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
P0C001 0.000128 45 35 1 77 3 arlR Response regulator ArlR Staphylococcus aureus (strain MW2)
Q6G9E6 0.000128 45 35 1 77 3 arlR Response regulator ArlR Staphylococcus aureus (strain MSSA476)
Q6GGZ3 0.000128 45 35 1 77 3 arlR Response regulator ArlR Staphylococcus aureus (strain MRSA252)
P0C000 0.000128 45 35 1 77 3 arlR Response regulator ArlR Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HG04 0.000128 45 35 1 77 3 arlR Response regulator ArlR Staphylococcus aureus (strain COL)
Q2YY03 0.000128 45 35 1 77 3 arlR Response regulator ArlR Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q9KJN4 0.000128 45 35 1 77 1 arlR Response regulator ArlR Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FH23 0.000128 45 35 1 77 3 arlR Response regulator ArlR Staphylococcus aureus (strain USA300)
P21649 0.000129 45 24 2 113 1 mrkE Protein MrkE Klebsiella pneumoniae
P9WGM3 0.00014 45 30 6 122 1 pdtaR Transcriptional regulatory protein PdtaR Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGM2 0.00014 45 30 6 122 3 pdtaR Transcriptional regulatory protein PdtaR Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q99U73 0.000141 45 35 1 77 3 arlR Response regulator ArlR Staphylococcus aureus (strain N315)
P52929 0.000155 45 26 2 141 3 spo0A Stage 0 sporulation protein A (Fragment) Brevibacillus parabrevis
P23221 0.000176 44 23 4 165 3 fixJ Transcriptional regulatory protein FixJ Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
Q2SFK0 0.000177 45 28 4 107 3 cheB3 Protein-glutamate methylesterase/protein-glutamine glutaminase 3 Hahella chejuensis (strain KCTC 2396)
P24072 0.000275 42 25 1 79 1 cheY Chemotaxis protein CheY Bacillus subtilis (strain 168)
Q311M8 0.000276 45 26 3 131 3 cheB1 Protein-glutamate methylesterase/protein-glutamine glutaminase 1 Oleidesulfovibrio alaskensis (strain ATCC BAA-1058 / DSM 17464 / G20)
Q1IRH0 0.000369 44 24 2 131 3 cheB1 Protein-glutamate methylesterase/protein-glutamine glutaminase 1 Koribacter versatilis (strain Ellin345)
Q6LTM2 0.000467 44 30 0 70 3 cheB2 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 Photobacterium profundum (strain SS9)
Q8FFE0 0.000506 43 27 1 76 3 ypdB Transcriptional regulatory protein YpdB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AE41 0.000528 43 27 1 76 3 ypdB Transcriptional regulatory protein YpdB Shigella flexneri
P0AE39 0.000528 43 27 1 76 1 ypdB Transcriptional regulatory protein YpdB Escherichia coli (strain K12)
P0AE40 0.000528 43 27 1 76 3 ypdB Transcriptional regulatory protein YpdB Escherichia coli O157:H7
B0R4K1 0.000574 42 23 1 113 1 cheY Chemotaxis protein CheY Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Q0A9Z5 0.000605 43 27 1 81 3 cheB Protein-glutamate methylesterase/protein-glutamine glutaminase Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)
Q8RAZ3 0.000632 43 28 2 112 3 cheB Protein-glutamate methylesterase/protein-glutamine glutaminase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
P62646 0.000717 43 27 0 81 3 cheB Protein-glutamate methylesterase/protein-glutamine glutaminase Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
O54294 0.001 42 22 3 128 1 csgD Probable csgAB operon transcriptional regulatory protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07930
Feature type CDS
Gene -
Product response regulator
Location 1652553 - 1653263 (strand: -1)
Length 711 (nucleotides) / 236 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2094
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00072 Response regulator receiver domain
PF00196 Bacterial regulatory proteins, luxR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2197 Signal transduction mechanisms (T)
Transcription (K)
TK DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains

Protein Sequence

MISVLVANINEFYRAGVGAIISATTGMKIVGEVKDSTGAVRWCRDHHADIVLLDIGFPSMSGLDAARKISRYASETKVIILTDEHALISPYKVMSSGAAGYLYQSSDRMDLLHAIRIISRGQRYVDSDIAQQTILDTRLHAHDSNPLDKLSHQERQVMVMISQGIKVTQIADKMCLSSKTVNSYRYRIFSKLNIDGDIKLTHLALRYGLIHIDSVVPPVSADSGGHNEYIPAVSRE

Flanking regions ( +/- flanking 50bp)

ACTTGTATAATTTCCGGTAAATTTATTGAAAATTCAGAAAGGAGTTCTGTGTGATTTCAGTATTGGTAGCAAATATCAATGAGTTTTACCGTGCCGGCGTTGGTGCCATTATTTCGGCGACAACAGGGATGAAAATCGTCGGGGAAGTAAAAGACAGTACCGGTGCTGTGCGCTGGTGTCGTGATCATCATGCGGACATTGTACTGCTTGATATCGGATTTCCGTCTATGAGCGGACTGGACGCGGCGCGGAAAATAAGCCGTTATGCTTCTGAAACTAAAGTTATTATCCTGACCGACGAACATGCTCTGATTTCACCGTATAAAGTGATGAGCAGTGGTGCCGCCGGTTATCTCTATCAAAGCAGTGACCGGATGGATTTACTGCATGCAATCCGGATCATCAGCCGTGGTCAGCGTTATGTTGACTCTGACATTGCACAGCAAACTATTCTGGATACCCGGTTGCATGCTCACGACAGCAATCCGCTGGATAAGCTCAGCCATCAGGAGCGTCAGGTCATGGTGATGATTTCACAGGGCATAAAAGTCACACAAATTGCCGATAAAATGTGTCTCAGCAGCAAGACGGTGAACAGTTATAGATATAGAATATTTAGTAAGCTAAATATTGATGGGGATATTAAACTAACCCATCTGGCACTCCGTTACGGATTGATCCATATTGATAGTGTTGTACCCCCTGTATCCGCAGATAGCGGCGGGCACAACGAATACATTCCCGCTGTAAGCAGAGAGTAGAGAGCCTGTACCCCGCATGGAAAAACCGGTTGTTACTGAATTTGATGCGA