Orthogroup:group_2094


Homologs in group_2094

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15760 FBDBKF_15760 Morganella morganii S1 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
EHELCC_17675 EHELCC_17675 Morganella morganii S2 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
NLDBIP_19345 NLDBIP_19345 Morganella morganii S4 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
LHKJJB_18115 LHKJJB_18115 Morganella morganii S3 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
HKOGLL_18965 HKOGLL_18965 Morganella morganii S5 citB DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains
F4V73_RS07930 F4V73_RS07930 Morganella psychrotolerans - response regulator
PMI_RS07405 PMI_RS07405 Proteus mirabilis HI4320 - LuxR C-terminal-related transcriptional regulator

Distribution of group_2094 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2094 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2094

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2094.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 citB 5
2 - 2

Product

# Product Occurence
1 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 5
2 response regulator 1
3 LuxR C-terminal-related transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2197 7 TK Signal transduction mechanisms (T)
Transcription (K)		 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00072 6 Response regulator receiver domain
PF00196 7 Bacterial regulatory proteins, luxR family

Annotations of the 152 SwissProt hits

Annotation Number of occurrences
CAI-1 autoinducer sensor kinase/phosphatase CqsS 1
Chemotaxis protein CheY 4
CsgBAC operon transcriptional regulatory protein 1
DNA-binding transcriptional activator DevR/DosR 2
DNA-binding transcriptional activator EvgA 4
DNA-binding transcriptional regulator NtrC 1
Fimbriae Z protein 3
Glycerol metabolism activator 2
Methanol utilization control regulatory protein MoxX 1
Nitrate/nitrite response regulator protein NarL 4
Nitrate/nitrite response regulator protein NarP 1
Nitrate/nitrite response regulator protein homolog 1
Nodulation protein W 1
Oxygen regulatory protein NreC 18
Probable csgAB operon transcriptional regulatory protein 1
Probable transcriptional regulatory protein NarL 2
Probable transcriptional regulatory protein SgaR 1
Protein MrkE 1
Protein-glutamate methylesterase/protein-glutamine glutaminase 14
Protein-glutamate methylesterase/protein-glutamine glutaminase 1 5
Protein-glutamate methylesterase/protein-glutamine glutaminase 2 3
Protein-glutamate methylesterase/protein-glutamine glutaminase 3 1
Protein-glutamate methylesterase/protein-glutamine glutaminase 4 1
Protein-glutamate methylesterase/protein-glutamine glutaminase of group 2 operon 1
Putative transcriptional regulator 1
Response regulator ArlR 9
Response regulator GacA 4
Response regulator Rre1 1
Response regulator SsrB 1
Response regulator UvrY 4
Response regulator protein TmoT 1
Response regulator protein TodT 3
Response regulator protein VraR 12
Stage 0 sporulation protein A 1
Stage 0 sporulation protein A (Fragment) 1
Transcriptional activator protein ExaE 1
Transcriptional regulatory protein DegU 2
Transcriptional regulatory protein DesR 1
Transcriptional regulatory protein DltR 2
Transcriptional regulatory protein FixJ 3
Transcriptional regulatory protein LiaR 1
Transcriptional regulatory protein LnrK 1
Transcriptional regulatory protein MctR 1
Transcriptional regulatory protein PdtaR 2
Transcriptional regulatory protein RcsB 7
Transcriptional regulatory protein TdiR 1
Transcriptional regulatory protein UhpA 5
Transcriptional regulatory protein YdfI 1
Transcriptional regulatory protein YpdB 4
Uncharacterized response regulatory protein YgeK 2
Uncharacterized transcriptional regulatory protein YhcZ 1
Uncharacterized transcriptional regulatory protein YvfU 1
Uncharacterized transcriptional regulatory protein YxjL 1
Virulence factors putative positive transcription regulator BvgA 3

Protein length

Min length 187
Max length 236
Mean length (sd) 216.9 (14.6)
Median length 219.0

Protein length distribution