Homologs in group_382

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14630 FBDBKF_14630 90.5 Morganella morganii S1 lolC lipoprotein-releasing ABC transporter permease subunit LolC
EHELCC_15435 EHELCC_15435 90.5 Morganella morganii S2 lolC lipoprotein-releasing ABC transporter permease subunit LolC
NLDBIP_15965 NLDBIP_15965 90.5 Morganella morganii S4 lolC lipoprotein-releasing ABC transporter permease subunit LolC
LHKJJB_15875 LHKJJB_15875 90.5 Morganella morganii S3 lolC lipoprotein-releasing ABC transporter permease subunit LolC
HKOGLL_14995 HKOGLL_14995 90.5 Morganella morganii S5 lolC lipoprotein-releasing ABC transporter permease subunit LolC
F4V73_RS05110 F4V73_RS05110 27.0 Morganella psychrotolerans - FtsX-like permease family protein
PMI_RS04310 PMI_RS04310 64.0 Proteus mirabilis HI4320 lolC lipoprotein-releasing ABC transporter permease subunit LolC

Distribution of the homologs in the orthogroup group_382

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_382

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADC3 3.11e-166 474 60 1 400 1 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli (strain K12)
P0ADC4 3.11e-166 474 60 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADC5 3.11e-166 474 60 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli O157:H7
P44252 5.93e-97 298 42 5 401 3 lolC Lipoprotein-releasing system transmembrane protein LolC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57382 2.9e-74 239 31 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q9PEF2 8.92e-68 223 34 8 417 3 lolC Lipoprotein-releasing system transmembrane protein LolC Xylella fastidiosa (strain 9a5c)
P57061 9.73e-67 220 33 10 421 3 lolC Lipoprotein-releasing system transmembrane protein LolC Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q87EF5 9.74e-67 220 34 8 417 3 lolC Lipoprotein-releasing system transmembrane protein LolC Xylella fastidiosa (strain Temecula1 / ATCC 700964)
P57062 3.01e-65 216 33 9 421 3 lolC Lipoprotein-releasing system transmembrane protein LolC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q8K9N8 3.56e-64 213 29 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P44250 2.64e-47 169 29 5 410 3 lolE Lipoprotein-releasing system transmembrane protein LolE Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P75958 8.8e-38 144 30 7 416 1 lolE Lipoprotein-releasing system transmembrane protein LolE Escherichia coli (strain K12)
Q8K9N7 3.17e-21 98 20 9 410 3 BUsg_286 Uncharacterized membrane protein BUsg_286 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q58902 8.47e-13 72 20 12 404 3 MJ1507 Uncharacterized ABC transporter permease MJ1507 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A1BE50 8.41e-10 64 36 3 137 3 macB Macrolide export ATP-binding/permease protein MacB Chlorobium phaeobacteroides (strain DSM 266 / SMG 266 / 2430)
Q8KFE9 7.51e-07 55 33 3 149 3 macB Macrolide export ATP-binding/permease protein MacB Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)
Q58207 8.81e-07 54 19 16 401 3 MJ0797 Uncharacterized ABC transporter permease MJ0797 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O35005 2.53e-06 53 23 7 235 2 ytrF ABC transporter permease YtrF Bacillus subtilis (strain 168)
O53900 1.33e-05 51 25 13 402 1 Rv0987 Uncharacterized ABC transporter permease protein Rv0987 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q92NU9 1.72e-05 50 21 12 403 3 macB Macrolide export ATP-binding/permease protein MacB Rhizobium meliloti (strain 1021)
Q6MPX9 1.82e-05 50 27 2 146 3 macB Macrolide export ATP-binding/permease protein MacB Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100)
P46324 5.7e-05 48 22 17 419 3 yvrN Uncharacterized ABC transporter permease YvrN Bacillus subtilis (strain 168)
Q8YIT2 0.000115 48 22 15 406 3 macB Macrolide export ATP-binding/permease protein MacB Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q3B5J7 0.000232 47 32 3 137 3 macB Macrolide export ATP-binding/permease protein MacB Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530)
Q2YRG7 0.000264 47 22 14 403 3 macB Macrolide export ATP-binding/permease protein MacB Brucella abortus (strain 2308)
Q3ATR5 0.000333 46 33 3 137 3 macB Macrolide export ATP-binding/permease protein MacB Chlorobium chlorochromatii (strain CaD3)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07425
Feature type CDS
Gene lolC
Product lipoprotein-releasing ABC transporter permease subunit LolC
Location 1550506 - 1551708 (strand: -1)
Length 1203 (nucleotides) / 400 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_382
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF02687 FtsX-like permease family
PF12704 MacB-like periplasmic core domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4591 Cell wall/membrane/envelope biogenesis (M) M ABC-type transport system involved in lipoprotein release, permease component LolC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09808 lipoprotein-releasing system permease protein ABC transporters -

Protein Sequence

MFQSVSFLIGLRYMRGRGGDRFARFVSLLSAIGITLGVAALITVTSVMNGFERSLQQSILDFMPQAVITTPAGVLDPQEHPVSQLSGLRDVVKTAPIVTGDVVLQSRGNVGIATVTGVDPQGTEPLMAHLVNTRASELAAGQYHVVLGEGVAVKMGLKRGDTVRVLVPNVSQLTPMGRIPSQRLFTVAGIFSSGSESDKNQILMNQDDAARLMRYAPGHITGWRLYLSQPLMVDTLSQQTLPDGLTWTDWRVQKGEFFQAVRMEKNMMGLLLGLIIAVAAFNIVTSLALLVMEKQTEVAILKTLGMTRGKIMLIFIIQGAGAGILGSVIGMLLGVLLSSQLNILMPLMGLIPKGIALPTVIEPLRVVTIGAAAMLISLLSTLWPAWRAAAVQPAEALRYE

Flanking regions ( +/- flanking 50bp)

CTTTATTATCCCTGAACACTTCGCTTTGGCAACAGGGGCGTTCAGATTTCATGTTTCAGTCTGTCTCATTTTTAATCGGTCTGCGTTATATGCGGGGACGGGGCGGCGATCGTTTCGCCCGTTTTGTTTCTCTGCTTTCCGCAATCGGTATCACACTAGGGGTCGCGGCGCTGATCACGGTCACGTCAGTGATGAACGGGTTCGAGCGTTCACTGCAACAAAGCATTCTTGATTTTATGCCGCAGGCGGTGATTACCACCCCGGCAGGTGTGCTGGATCCGCAGGAGCATCCGGTTTCTCAACTCTCAGGGCTGCGCGATGTGGTAAAGACCGCGCCGATTGTCACCGGCGATGTCGTGCTGCAAAGCAGGGGAAATGTCGGAATAGCCACGGTAACAGGGGTTGATCCGCAGGGAACGGAGCCACTGATGGCGCACCTGGTGAACACCCGGGCGTCTGAACTGGCGGCGGGGCAGTACCATGTGGTGCTGGGTGAGGGCGTGGCGGTCAAAATGGGACTGAAACGCGGGGATACTGTCCGTGTTCTGGTGCCGAATGTCTCACAACTGACGCCGATGGGGCGCATTCCCAGCCAGCGGTTATTTACTGTGGCGGGTATCTTTTCCTCGGGCAGCGAGTCTGATAAAAACCAAATTCTGATGAATCAGGACGATGCCGCACGTCTGATGCGCTATGCGCCGGGGCACATCACCGGCTGGCGGTTGTATCTGTCACAGCCTCTGATGGTCGATACACTCAGTCAGCAGACTTTACCGGACGGGCTGACCTGGACAGACTGGCGCGTTCAGAAAGGCGAGTTTTTCCAGGCGGTGCGCATGGAAAAAAATATGATGGGCCTGTTGCTTGGTCTGATTATTGCCGTCGCGGCATTTAATATTGTTACATCACTGGCGCTGCTGGTGATGGAGAAACAAACCGAGGTTGCTATCCTGAAAACGCTGGGTATGACGCGCGGCAAAATAATGCTGATTTTTATCATTCAGGGCGCAGGTGCGGGGATACTCGGCTCCGTGATCGGTATGCTTCTGGGGGTTCTGCTCTCTTCACAACTGAATATTCTGATGCCGCTGATGGGGCTTATCCCGAAAGGTATCGCGCTGCCGACGGTGATTGAACCGTTGCGCGTGGTGACTATCGGCGCGGCGGCAATGCTTATCTCTTTATTATCCACACTCTGGCCTGCGTGGCGGGCGGCAGCGGTACAACCCGCGGAGGCTTTACGTTATGAGTGAGTTATTACTGGCATGTCGTCAGTTATGCAAATCCTACCACGAGGGTGTGG