Homologs in group_382

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14630 FBDBKF_14630 65.0 Morganella morganii S1 lolC lipoprotein-releasing ABC transporter permease subunit LolC
EHELCC_15435 EHELCC_15435 65.0 Morganella morganii S2 lolC lipoprotein-releasing ABC transporter permease subunit LolC
NLDBIP_15965 NLDBIP_15965 65.0 Morganella morganii S4 lolC lipoprotein-releasing ABC transporter permease subunit LolC
LHKJJB_15875 LHKJJB_15875 65.0 Morganella morganii S3 lolC lipoprotein-releasing ABC transporter permease subunit LolC
HKOGLL_14995 HKOGLL_14995 65.0 Morganella morganii S5 lolC lipoprotein-releasing ABC transporter permease subunit LolC
F4V73_RS05110 F4V73_RS05110 26.5 Morganella psychrotolerans - FtsX-like permease family protein
F4V73_RS07425 F4V73_RS07425 64.0 Morganella psychrotolerans lolC lipoprotein-releasing ABC transporter permease subunit LolC

Distribution of the homologs in the orthogroup group_382

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_382

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADC3 1.06e-159 457 60 1 400 1 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli (strain K12)
P0ADC4 1.06e-159 457 60 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADC5 1.06e-159 457 60 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli O157:H7
P44252 1.14e-99 305 44 8 403 3 lolC Lipoprotein-releasing system transmembrane protein LolC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9PEF2 5.03e-74 239 35 8 417 3 lolC Lipoprotein-releasing system transmembrane protein LolC Xylella fastidiosa (strain 9a5c)
P57382 1.05e-72 235 32 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q87EF5 2.18e-72 235 35 8 417 3 lolC Lipoprotein-releasing system transmembrane protein LolC Xylella fastidiosa (strain Temecula1 / ATCC 700964)
P57062 8.37e-70 228 36 10 419 3 lolC Lipoprotein-releasing system transmembrane protein LolC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P57061 5.98e-69 226 36 10 419 3 lolC Lipoprotein-releasing system transmembrane protein LolC Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q8K9N8 1.57e-59 201 31 3 402 3 lolC Lipoprotein-releasing system transmembrane protein LolC Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P44250 4.07e-54 187 31 8 414 3 lolE Lipoprotein-releasing system transmembrane protein LolE Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P75958 4.06e-42 155 30 6 409 1 lolE Lipoprotein-releasing system transmembrane protein LolE Escherichia coli (strain K12)
Q8K9N7 6.19e-19 91 25 11 405 3 BUsg_286 Uncharacterized membrane protein BUsg_286 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q58902 3.15e-10 65 22 10 277 3 MJ1507 Uncharacterized ABC transporter permease MJ1507 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A0KGB3 1.32e-07 57 22 11 410 3 macB1 Macrolide export ATP-binding/permease protein MacB 1 Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
O35005 5.04e-06 52 23 5 209 2 ytrF ABC transporter permease YtrF Bacillus subtilis (strain 168)
P46324 4.9e-05 48 27 3 134 3 yvrN Uncharacterized ABC transporter permease YvrN Bacillus subtilis (strain 168)
P77504 5.12e-05 49 27 9 277 3 ybbP Uncharacterized ABC transporter permease YbbP Escherichia coli (strain K12)
A1BE50 0.000221 47 23 4 172 3 macB Macrolide export ATP-binding/permease protein MacB Chlorobium phaeobacteroides (strain DSM 266 / SMG 266 / 2430)
Q2KVS6 0.00037 46 21 13 407 3 macB Macrolide export ATP-binding/permease protein MacB Bordetella avium (strain 197N)
Q6MPX9 0.000454 46 26 5 153 3 macB Macrolide export ATP-binding/permease protein MacB Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04310
Feature type CDS
Gene lolC
Product lipoprotein-releasing ABC transporter permease subunit LolC
Location 968901 - 970103 (strand: 1)
Length 1203 (nucleotides) / 400 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_382
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF02687 FtsX-like permease family
PF12704 MacB-like periplasmic core domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4591 Cell wall/membrane/envelope biogenesis (M) M ABC-type transport system involved in lipoprotein release, permease component LolC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09808 lipoprotein-releasing system permease protein ABC transporters -

Protein Sequence

MYNSVSFFIGLRYMRGRAVDKFGRFVSWLSALGIMLGVAALITVTSVMNGFERSLQNSILAYIPQAVITTPNGQLPKQDSTAQMLLKREDVINVVPLVEGDVVLQSKDNIGVGVMLGIDKAQDEPLTQFIRYGDFSLLKPGEYGVILGSGLAKQLKTKEGDSIRLIVPGVSQLTPMGRVPSQRLFTVKGIFQSGGDADASQLLVNQQDAARLMRYQPGNITGWRLFFSTPLNIEKYSAEPLPAGLSWKDWRERKGEFFQAVKMEKNMMGLLLSLIIAVAAFNIITSLSLLVMEKQGEVAILQTMGLKRSQIMSIFMLQGAGAGILGAIAGGLLGALLSSQLNVIMPAVGLIPHGVELPATLEWSRVFMIGFAAIVISLLSTLYPSWRAATIQPAEALRYE

Flanking regions ( +/- flanking 50bp)

TTTATTATCCCTGAACACTTAGCATTAGCAACAGGAACAGCACAGTTTTCATGTACAATTCTGTCTCATTTTTTATAGGGCTCCGTTATATGCGGGGTCGCGCAGTCGACAAATTTGGTCGATTCGTCTCATGGCTATCCGCTTTAGGGATTATGCTGGGTGTTGCGGCATTGATCACAGTGACTTCTGTGATGAATGGCTTTGAACGCTCATTACAAAACAGCATTTTGGCCTATATTCCACAAGCTGTTATCACAACACCCAATGGGCAGCTACCCAAACAAGATAGTACTGCACAAATGTTATTAAAACGAGAAGATGTTATCAATGTCGTTCCTTTAGTTGAAGGGGATGTGGTATTACAAAGTAAAGATAATATCGGTGTTGGCGTGATGTTAGGGATTGATAAAGCACAAGATGAACCCCTAACACAGTTTATTCGCTATGGCGATTTCTCGTTATTAAAACCGGGAGAATATGGTGTGATCCTCGGTAGTGGTTTAGCTAAACAGCTAAAAACCAAAGAAGGGGATAGCATTCGCCTTATTGTTCCCGGCGTAAGCCAACTCACCCCAATGGGCCGAGTGCCTAGCCAACGACTGTTTACTGTCAAAGGTATTTTCCAAAGTGGTGGTGATGCTGATGCTTCTCAACTTCTGGTCAATCAACAAGATGCGGCGCGTTTGATGCGCTATCAACCCGGCAATATTACCGGATGGCGTCTATTCTTCTCAACCCCCCTTAATATTGAAAAATACAGTGCTGAACCTTTGCCAGCAGGTTTAAGTTGGAAAGATTGGCGTGAACGAAAGGGCGAATTTTTCCAAGCAGTGAAAATGGAAAAAAATATGATGGGCTTATTATTAAGCCTAATTATTGCGGTCGCCGCGTTTAATATTATTACTTCGCTTTCATTACTGGTGATGGAAAAACAAGGTGAAGTGGCAATATTACAAACCATGGGCTTAAAGCGTTCACAGATAATGTCTATTTTTATGCTACAAGGAGCAGGTGCCGGTATTTTAGGTGCTATTGCCGGAGGTTTGTTAGGGGCGTTACTATCAAGCCAACTAAATGTGATTATGCCTGCGGTAGGGCTTATTCCTCATGGGGTAGAATTACCCGCGACTTTAGAGTGGAGCCGAGTCTTTATGATTGGTTTTGCCGCTATTGTGATTTCACTATTATCGACTTTATACCCGTCTTGGCGGGCCGCAACTATTCAGCCAGCAGAGGCGCTACGTTATGAGTAATACCCCTTTATTACAATGTCATGCACTTTGTAAGCAGTATCAAGATGGTG