Homologs in group_382

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14630 FBDBKF_14630 100.0 Morganella morganii S1 lolC lipoprotein-releasing ABC transporter permease subunit LolC
EHELCC_15435 EHELCC_15435 100.0 Morganella morganii S2 lolC lipoprotein-releasing ABC transporter permease subunit LolC
LHKJJB_15875 LHKJJB_15875 100.0 Morganella morganii S3 lolC lipoprotein-releasing ABC transporter permease subunit LolC
HKOGLL_14995 HKOGLL_14995 100.0 Morganella morganii S5 lolC lipoprotein-releasing ABC transporter permease subunit LolC
F4V73_RS05110 F4V73_RS05110 27.3 Morganella psychrotolerans - FtsX-like permease family protein
F4V73_RS07425 F4V73_RS07425 90.5 Morganella psychrotolerans lolC lipoprotein-releasing ABC transporter permease subunit LolC
PMI_RS04310 PMI_RS04310 65.0 Proteus mirabilis HI4320 lolC lipoprotein-releasing ABC transporter permease subunit LolC

Distribution of the homologs in the orthogroup group_382

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_382

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADC3 3.37e-172 489 63 1 400 1 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli (strain K12)
P0ADC4 3.37e-172 489 63 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADC5 3.37e-172 489 63 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli O157:H7
P44252 3e-97 298 42 5 401 3 lolC Lipoprotein-releasing system transmembrane protein LolC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57382 1.38e-75 243 31 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P57061 1.2e-70 231 34 10 418 3 lolC Lipoprotein-releasing system transmembrane protein LolC Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P57062 4.25e-69 226 34 10 418 3 lolC Lipoprotein-releasing system transmembrane protein LolC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9PEF2 4.68e-69 226 34 8 417 3 lolC Lipoprotein-releasing system transmembrane protein LolC Xylella fastidiosa (strain 9a5c)
Q87EF5 2.04e-68 224 34 9 418 3 lolC Lipoprotein-releasing system transmembrane protein LolC Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q8K9N8 6.01e-64 213 29 1 400 3 lolC Lipoprotein-releasing system transmembrane protein LolC Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P44250 3.79e-44 161 28 5 410 3 lolE Lipoprotein-releasing system transmembrane protein LolE Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P75958 1.35e-37 143 28 7 416 1 lolE Lipoprotein-releasing system transmembrane protein LolE Escherichia coli (strain K12)
Q8K9N7 8.66e-24 105 22 9 413 3 BUsg_286 Uncharacterized membrane protein BUsg_286 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q58902 4.56e-10 64 20 14 412 3 MJ1507 Uncharacterized ABC transporter permease MJ1507 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A1BE50 6.14e-09 61 32 2 134 3 macB Macrolide export ATP-binding/permease protein MacB Chlorobium phaeobacteroides (strain DSM 266 / SMG 266 / 2430)
O35005 3.77e-07 55 23 6 209 2 ytrF ABC transporter permease YtrF Bacillus subtilis (strain 168)
Q58207 2.19e-06 53 25 2 110 3 MJ0797 Uncharacterized ABC transporter permease MJ0797 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P46324 4.05e-06 52 26 2 134 3 yvrN Uncharacterized ABC transporter permease YvrN Bacillus subtilis (strain 168)
Q8KFE9 4.77e-06 52 32 3 149 3 macB Macrolide export ATP-binding/permease protein MacB Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)
Q6MPX9 1.61e-05 50 28 2 146 3 macB Macrolide export ATP-binding/permease protein MacB Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100)
Q3B5J7 0.000701 45 29 2 134 3 macB Macrolide export ATP-binding/permease protein MacB Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530)
O53900 0.000832 45 23 14 397 1 Rv0987 Uncharacterized ABC transporter permease protein Rv0987 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_15965
Feature type CDS
Gene lolC
Product lipoprotein-releasing ABC transporter permease subunit LolC
Location 52337 - 53539 (strand: -1)
Length 1203 (nucleotides) / 400 (amino acids)

Contig

Accession ZDB_532
Length 116685 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_382
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF02687 FtsX-like permease family
PF12704 MacB-like periplasmic core domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4591 Cell wall/membrane/envelope biogenesis (M) M ABC-type transport system involved in lipoprotein release, permease component LolC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09808 lipoprotein-releasing system permease protein ABC transporters -

Protein Sequence

MFQSVSFLIGLRYMRGRGTDRFARFVSLLSAIGITLGVTALITVTSVMNGFERSLQQSILDFMPQAVITTGNGVLDPQTHPVSQLAGLRDVVKTAPIVTGDVVLQSTGNVGIASVTGIDPLGDEPLMNYLVNTRPSELAAGQYHVVVGEGVAKRMGLKRGDSVRILVPNVSQLTPMGRIPSQRLFTVAGFFSSGSESDNTQVLMNQEDAARLMRYPAGNITGWRLYLSQPLQVDSLSQQTLPEGLVWTDWRVQKGEFFQAVRMEKNMMGLLLSLIIAVAAFNIITSLALLVMEKQTEVAILKTLGMTRGKIMLIFMIQGAGAGILGSVIGVLLGTLLSSQLNILMPLLGLIPKGIALPTVIEPLRVITIGAAAMLISLLSTLWPAWRAAAVQPAEALRYE

Flanking regions ( +/- flanking 50bp)

CTTTATTATCCCTGAACACTTCGCTTTGGCAACAGGGGCGTTCAGATTTCATGTTTCAGTCTGTCTCATTTTTAATCGGTCTGCGTTACATGCGGGGACGCGGCACGGATCGCTTTGCCCGTTTTGTCTCGCTGCTTTCCGCCATCGGCATCACGCTGGGGGTGACAGCACTTATCACCGTGACATCCGTGATGAACGGTTTTGAACGCTCATTGCAGCAGAGTATCCTCGATTTTATGCCGCAGGCGGTAATCACCACCGGAAACGGCGTGCTGGATCCGCAGACGCATCCGGTCTCACAACTCGCCGGGCTGCGTGATGTGGTAAAAACCGCCCCGATTGTCACCGGTGATGTGGTATTGCAGAGCACCGGCAATGTGGGGATCGCCTCCGTGACCGGAATTGATCCGCTGGGGGATGAACCGCTGATGAATTATCTGGTGAATACCCGGCCGTCTGAGCTGGCGGCAGGTCAGTATCATGTGGTGGTCGGCGAAGGTGTGGCGAAACGCATGGGGCTTAAACGCGGGGATAGTGTCCGTATCCTGGTGCCGAATGTGTCGCAGTTGACGCCGATGGGACGCATCCCGAGCCAGCGCCTGTTCACCGTGGCGGGCTTTTTCTCCTCCGGTAGTGAATCCGATAACACCCAGGTGCTGATGAACCAGGAGGATGCGGCGCGTCTGATGCGCTATCCGGCGGGTAATATTACCGGCTGGCGTCTCTATCTGTCACAGCCGTTACAGGTGGACAGCCTCAGTCAGCAGACATTGCCGGAAGGGCTGGTCTGGACAGACTGGCGCGTGCAGAAAGGAGAGTTTTTCCAGGCTGTGCGCATGGAGAAAAATATGATGGGGCTGCTGCTCAGCCTGATTATCGCCGTGGCCGCGTTTAATATCATTACCTCACTGGCCTTGCTGGTGATGGAAAAACAGACCGAAGTGGCCATCCTGAAAACCCTGGGAATGACACGCGGCAAAATTATGCTGATCTTTATGATTCAGGGCGCGGGGGCAGGGATCCTCGGCTCGGTGATCGGCGTTCTGCTGGGCACACTGCTATCGTCACAACTGAATATTCTGATGCCGCTGCTGGGGCTGATCCCGAAAGGAATCGCGCTGCCGACGGTCATTGAGCCGCTGCGCGTCATCACTATCGGCGCGGCTGCCATGCTTATCTCTTTATTATCCACACTCTGGCCTGCGTGGCGGGCGGCAGCGGTACAACCCGCGGAGGCTTTACGTTATGAGTGAGTTATTACTGGCATGTCGTCAGTTATGCAAATCCTATCATGAGGGCACAG