Orthogroup:group_382


Homologs in group_382

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14630 FBDBKF_14630 Morganella morganii S1 lolC lipoprotein-releasing ABC transporter permease subunit LolC
EHELCC_15435 EHELCC_15435 Morganella morganii S2 lolC lipoprotein-releasing ABC transporter permease subunit LolC
NLDBIP_15965 NLDBIP_15965 Morganella morganii S4 lolC lipoprotein-releasing ABC transporter permease subunit LolC
LHKJJB_15875 LHKJJB_15875 Morganella morganii S3 lolC lipoprotein-releasing ABC transporter permease subunit LolC
HKOGLL_14995 HKOGLL_14995 Morganella morganii S5 lolC lipoprotein-releasing ABC transporter permease subunit LolC
F4V73_RS05110 F4V73_RS05110 Morganella psychrotolerans - FtsX-like permease family protein
F4V73_RS07425 F4V73_RS07425 Morganella psychrotolerans lolC lipoprotein-releasing ABC transporter permease subunit LolC
PMI_RS04310 PMI_RS04310 Proteus mirabilis HI4320 lolC lipoprotein-releasing ABC transporter permease subunit LolC

Distribution of group_382 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_382 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_382

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_382.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lolC 7
2 - 1

Product

# Product Occurence
1 lipoprotein-releasing ABC transporter permease subunit LolC 7
2 FtsX-like permease family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4591 8 M Cell wall/membrane/envelope biogenesis (M) ABC-type transport system involved in lipoprotein release, permease component LolC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02004 1 putative ABC transport system permease protein - -
K09808 7 lipoprotein-releasing system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02687 8 FtsX-like permease family
PF12704 7 MacB-like periplasmic core domain

Annotations of the 100 SwissProt hits

Annotation Number of occurrences
ABC transporter permease YtrF 1
Lipoprotein-releasing system transmembrane protein LolC 10
Lipoprotein-releasing system transmembrane protein LolE 2
Macrolide export ATP-binding/permease protein MacB 54
Macrolide export ATP-binding/permease protein MacB 1 6
Macrolide export ATP-binding/permease protein MacB 1/2 1
Macrolide export ATP-binding/permease protein MacB 2 6
Probable export ATP-binding/permease protein MacB 1
Probable export ATP-binding/permease protein PFL_2149 1
Probable export ATP-binding/permease protein Pfl01_2215 1
Probable syringafactin export ATP-binding/permease protein SyfD 2
Pyoverdine export ATP-binding/permease protein PvdT 9
Uncharacterized ABC transporter permease MJ0797 1
Uncharacterized ABC transporter permease MJ1507 1
Uncharacterized ABC transporter permease YbbP 1
Uncharacterized ABC transporter permease YvrN 1
Uncharacterized ABC transporter permease protein Rv0987 1
Uncharacterized membrane protein BUsg_286 1

Protein length

Min length 400
Max length 461
Mean length (sd) 407.6 (21.6)
Median length 400.0

Protein length distribution