Homologs in group_37

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00175 FBDBKF_00175 46.3 Morganella morganii S1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
FBDBKF_00910 FBDBKF_00910 81.5 Morganella morganii S1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
EHELCC_00635 EHELCC_00635 81.5 Morganella morganii S2 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
EHELCC_01370 EHELCC_01370 46.3 Morganella morganii S2 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
NLDBIP_02090 NLDBIP_02090 46.3 Morganella morganii S4 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
NLDBIP_02825 NLDBIP_02825 81.5 Morganella morganii S4 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
LHKJJB_03605 LHKJJB_03605 46.3 Morganella morganii S3 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
LHKJJB_04340 LHKJJB_04340 81.5 Morganella morganii S3 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
HKOGLL_02705 HKOGLL_02705 81.5 Morganella morganii S5 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
HKOGLL_03440 HKOGLL_03440 46.3 Morganella morganii S5 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
F4V73_RS07715 F4V73_RS07715 42.5 Morganella psychrotolerans lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
PMI_RS03970 PMI_RS03970 43.1 Proteus mirabilis HI4320 lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
PMI_RS08250 PMI_RS08250 67.7 Proteus mirabilis HI4320 - Kdo(2)-lipid IV(A) acyltransferase

Distribution of the homologs in the orthogroup group_37

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_37

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACV0 5.65e-144 410 61 0 306 1 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli (strain K12)
P0ACV1 5.65e-144 410 61 0 306 3 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli O157:H7
P0ACV3 6.36e-117 342 51 1 300 3 lpxP Lipid A biosynthesis acyltransferase Shigella flexneri
P0ACV2 6.36e-117 342 51 1 300 1 lpxP Lipid A biosynthesis palmitoleoyltransferase Escherichia coli (strain K12)
P45239 1.07e-112 331 51 4 307 3 lpxL Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44567 1.84e-37 138 28 7 307 3 lpxM Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P24205 1.05e-36 137 31 7 314 1 lpxM Lipid A biosynthesis myristoyltransferase Escherichia coli (strain K12)
P59198 5.86e-36 135 31 7 314 2 lpxM1 Lipid A biosynthesis acyltransferase 1 Shigella flexneri
O06659 2.62e-31 122 29 8 310 2 lpxM2 Lipid A biosynthesis acyltransferase 2 Shigella flexneri

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06905
Feature type CDS
Gene -
Product Kdo(2)-lipid IV(A) acyltransferase
Location 1431338 - 1432279 (strand: 1)
Length 942 (nucleotides) / 313 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_37
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF03279 Bacterial lipid A biosynthesis acyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1560 Lipid transport and metabolism (I) I Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)

Kegg Ortholog Annotation(s)

Protein Sequence

MITAPVFKRTLLHPRYWLTWIGAGILYVLVLLPYPVIYRLGTWLGRLSMHFLKSRTAIADRNLQLCFPDMPEAKRKAMVIANFESVGMALFETAMAWFWPDWRIKRWFRVDGFEHISKVQDSGRGVIVIGIHFLTLELGARMIGIMSPGVGVYRPNDNPVIDLIQTTGRMRSNKSMIDRKDVKGMVRALRQGDILWYAPDHDYGPHKSVFAPFFAVEKTATITGTSVLVKAGRAELVPFTPRRLPGGKGYELLVQPPVEGFPENDEVAAATFVNHIVEQEILRAPAQYMWLHRRFKTRPEGEPSLYDNRDNVH

Flanking regions ( +/- flanking 50bp)

TATATCATTTACCTGCATCTCTGTGATGCATCCGACAACGATTTCTGACTATGATTACAGCACCTGTTTTTAAGCGCACATTGTTGCATCCCCGTTACTGGCTGACCTGGATTGGTGCAGGAATATTGTATGTTCTGGTTCTGCTGCCCTATCCTGTCATTTACCGGTTGGGTACGTGGCTGGGCCGCCTGTCTATGCACTTTCTGAAAAGTCGTACCGCGATTGCGGATCGCAATCTGCAACTGTGCTTTCCTGATATGCCTGAGGCAAAACGCAAAGCCATGGTTATTGCTAATTTTGAATCTGTCGGCATGGCGCTGTTTGAAACCGCAATGGCATGGTTCTGGCCGGACTGGCGGATAAAGCGCTGGTTCCGGGTCGATGGCTTTGAGCACATCAGTAAAGTGCAGGATTCAGGCAGAGGCGTCATTGTTATCGGTATTCATTTTCTCACCCTGGAACTCGGCGCGCGGATGATCGGCATTATGAGCCCCGGGGTAGGCGTTTACCGTCCGAATGATAACCCGGTGATAGACCTGATACAGACTACCGGGCGCATGCGCTCAAATAAATCAATGATCGACCGCAAAGACGTAAAAGGAATGGTGCGCGCCCTGCGTCAGGGAGATATTCTCTGGTACGCCCCTGATCATGACTATGGTCCGCATAAGAGTGTTTTTGCCCCGTTCTTTGCTGTTGAAAAAACCGCCACAATTACCGGAACATCCGTTCTGGTCAAAGCCGGACGTGCGGAATTAGTGCCGTTCACGCCCCGCCGTTTACCGGGTGGTAAAGGTTATGAATTACTGGTTCAGCCGCCTGTGGAGGGTTTTCCGGAAAATGATGAAGTCGCCGCTGCAACTTTTGTGAATCATATTGTGGAACAAGAGATCCTGCGCGCACCTGCACAATATATGTGGTTACACCGGCGTTTTAAAACCCGGCCGGAGGGCGAACCGTCCCTTTACGATAACCGGGACAATGTACATTAATACACACACGGCTGCTTCTTTGAAACAGCCGTGTTTGTTTGAAGTATACA