Homologs in group_9

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20 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05295 FBDBKF_05295 56.6 Morganella morganii S1 oppA oligopeptide ABC transporter substrate-binding protein OppA
FBDBKF_05300 FBDBKF_05300 87.3 Morganella morganii S1 oppA ABC-type oligopeptide transport system, periplasmic component
FBDBKF_05570 FBDBKF_05570 41.7 Morganella morganii S1 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12020 EHELCC_12020 41.7 Morganella morganii S2 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12290 EHELCC_12290 87.3 Morganella morganii S2 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12295 EHELCC_12295 56.6 Morganella morganii S2 oppA oligopeptide ABC transporter substrate-binding protein OppA
NLDBIP_12360 NLDBIP_12360 41.7 Morganella morganii S4 oppA ABC-type oligopeptide transport system, periplasmic component
NLDBIP_12630 NLDBIP_12630 87.3 Morganella morganii S4 oppA ABC-type oligopeptide transport system, periplasmic component
NLDBIP_12635 NLDBIP_12635 56.6 Morganella morganii S4 oppA oligopeptide ABC transporter substrate-binding protein OppA
LHKJJB_12220 LHKJJB_12220 41.7 Morganella morganii S3 oppA ABC-type oligopeptide transport system, periplasmic component
LHKJJB_12490 LHKJJB_12490 87.3 Morganella morganii S3 oppA ABC-type oligopeptide transport system, periplasmic component
LHKJJB_12495 LHKJJB_12495 56.6 Morganella morganii S3 oppA oligopeptide ABC transporter substrate-binding protein OppA
HKOGLL_10835 HKOGLL_10835 41.7 Morganella morganii S5 oppA ABC-type oligopeptide transport system, periplasmic component
HKOGLL_11105 HKOGLL_11105 87.3 Morganella morganii S5 oppA ABC-type oligopeptide transport system, periplasmic component
HKOGLL_11110 HKOGLL_11110 56.6 Morganella morganii S5 oppA oligopeptide ABC transporter substrate-binding protein OppA
F4V73_RS03735 F4V73_RS03735 42.9 Morganella psychrotolerans - peptide ABC transporter substrate-binding protein
F4V73_RS05750 F4V73_RS05750 56.2 Morganella psychrotolerans oppA oligopeptide ABC transporter substrate-binding protein OppA
PMI_RS06600 PMI_RS06600 43.1 Proteus mirabilis HI4320 - peptide ABC transporter substrate-binding protein
PMI_RS07140 PMI_RS07140 57.0 Proteus mirabilis HI4320 oppA oligopeptide ABC transporter substrate-binding protein OppA
PMI_RS07145 PMI_RS07145 64.1 Proteus mirabilis HI4320 - ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_9

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_9

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23843 0.0 660 57 1 540 1 oppA Periplasmic oligopeptide-binding protein OppA Escherichia coli (strain K12)
P06202 0.0 642 57 0 514 1 oppA Periplasmic oligopeptide-binding protein OppA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P71370 0.0 553 50 4 536 3 oppA Periplasmic oligopeptide-binding protein OppA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P77348 1.59e-155 457 44 4 538 1 mppA Periplasmic murein peptide-binding protein MppA Escherichia coli (strain K12)
Q46863 2.71e-140 419 42 4 527 1 ygiS Probable deoxycholate-binding periplasmic protein YgiS Escherichia coli (strain K12)
P24141 3.68e-68 232 28 12 525 1 oppA Oligopeptide-binding protein OppA Bacillus subtilis (strain 168)
P26906 2.57e-65 224 29 17 547 1 dppE Dipeptide-binding protein DppE Bacillus subtilis (strain 168)
P44572 1.55e-57 203 28 11 478 3 HI_0213 Putative binding protein HI_0213 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A2RI74 3.72e-45 170 28 18 541 1 dppA Dipeptide-binding protein Lactococcus lactis subsp. cremoris (strain MG1363)
P76128 4.82e-36 144 27 16 542 2 ddpA Probable D,D-dipeptide-binding periplasmic protein DdpA Escherichia coli (strain K12)
A0A0H2ZGV7 6.35e-30 126 25 16 474 1 dppA4 Di/tripeptide-binding protein 4 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q9HVS4 3.65e-24 109 22 16 487 1 PA4497 Tripeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZGW2 5.07e-24 109 22 16 487 1 dppA2 Di/tripeptide-binding protein 2 Pseudomonas aeruginosa (strain UCBPP-PA14)
P33590 6.9e-24 108 26 21 479 1 nikA Nickel-binding periplasmic protein Escherichia coli (strain K12)
Q8Z863 1.83e-22 104 22 13 523 3 gsiB Glutathione-binding protein GsiB Salmonella typhi
Q57RB1 2.02e-22 104 22 13 523 3 gsiB Glutathione-binding protein GsiB Salmonella choleraesuis (strain SC-B67)
Q8ZQM3 2.22e-22 103 22 13 523 3 gsiB Glutathione-binding protein GsiB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q1RE95 3.05e-22 103 22 11 498 3 gsiB Glutathione-binding protein GsiB Escherichia coli (strain UTI89 / UPEC)
Q8CW88 3.05e-22 103 22 11 498 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1A968 3.05e-22 103 22 11 498 3 gsiB Glutathione-binding protein GsiB Escherichia coli O1:K1 / APEC
P75797 3.73e-22 103 22 11 498 1 gsiB Glutathione-binding protein GsiB Escherichia coli (strain K12)
Q32IB6 3.97e-22 103 22 11 498 3 gsiB Glutathione-binding protein GsiB Shigella dysenteriae serotype 1 (strain Sd197)
P06109 5.54e-22 103 24 14 482 3 xp55 Protein XP55 Streptomyces lividans
Q5PGP4 6.48e-22 102 23 13 524 3 gsiB Glutathione-binding protein GsiB Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q6D3B0 6.62e-22 102 23 13 503 3 gsiB Glutathione-binding protein GsiB Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q8X6V9 1.39e-21 101 22 11 498 3 gsiB Glutathione-binding protein GsiB Escherichia coli O157:H7
Q3Z3V3 2.09e-21 101 22 11 498 3 gsiB Glutathione-binding protein GsiB Shigella sonnei (strain Ss046)
Q323W4 3.23e-21 100 22 11 498 3 gsiB Glutathione-binding protein GsiB Shigella boydii serotype 4 (strain Sb227)
Q821B3 3.57e-21 100 22 11 498 3 gsiB Glutathione-binding protein GsiB Shigella flexneri
Q0TJL8 1.12e-20 99 22 11 498 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q0T6D2 4.76e-20 97 22 10 498 3 gsiB Glutathione-binding protein GsiB Shigella flexneri serotype 5b (strain 8401)
A0A0H2ZGV2 4.24e-19 94 21 16 546 1 dppA1 Di/tripeptide-binding protein 1 Pseudomonas aeruginosa (strain UCBPP-PA14)
P31306 7.59e-19 94 25 9 304 1 sarA Oligopeptide-binding protein SarA Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)
P0A4G1 4.33e-18 91 24 19 495 1 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P0A4G0 4.33e-18 91 24 19 495 3 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q9HVS1 4.61e-18 90 21 17 530 1 PA4500 Dipeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P33950 1.3e-17 89 23 16 470 1 hbpA Heme-binding protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P23847 1.6e-17 89 23 17 471 1 dppA Dipeptide-binding protein Escherichia coli (strain K12)
A0A0H2ZGN2 6.26e-17 87 21 16 530 1 dppA3 Di/tripeptide-binding protein 3 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZI72 2.22e-15 82 22 13 487 1 dppA5 Probable di/tripeptide-binding protein 5 Pseudomonas aeruginosa (strain UCBPP-PA14)
P35592 2e-14 79 24 10 320 3 aliA Oligopeptide-binding protein AliA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P36634 3.06e-13 75 21 19 551 2 sapA Peptide transport periplasmic protein SapA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8FWN7 1.14e-12 73 24 16 441 3 BRA0409 Putative ABC transporter peptide-binding protein BRA0409/BS1330_II0406 Brucella suis biovar 1 (strain 1330)
Q2YK66 1.14e-12 73 24 16 441 3 BAB2_0812 Putative ABC transporter peptide-binding protein BAB2_0812 Brucella abortus (strain 2308)
Q577J8 1.14e-12 73 24 16 441 3 BruAb2_0792 Putative ABC transporter peptide-binding protein BruAb2_0792 Brucella abortus biovar 1 (strain 9-941)
A5VU91 1.14e-12 73 24 16 441 3 BOV_A0352 Putative ABC transporter peptide-binding protein BOV_A0352 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q8YBP0 1.17e-12 73 24 16 441 3 BMEII0859 Putative ABC transporter peptide-binding protein BMEII0859 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FUX2 1.76e-12 73 21 20 540 3 BRA1090 Putative peptide-binding periplasmic protein BRA1090/BS1330_II1082 Brucella suis biovar 1 (strain 1330)
Q2YJK2 1.78e-12 73 21 20 540 3 BAB2_1049 Putative peptide-binding periplasmic protein BAB2_1049 Brucella abortus (strain 2308)
Q8VQK3 1.78e-12 73 21 20 540 3 BruAb2_1030 Putative peptide-binding periplasmic protein BruAb2_1030 Brucella abortus biovar 1 (strain 9-941)
Q47622 2.89e-12 72 21 15 479 3 sapA Probable ABC transporter periplasmic-binding protein SapA Escherichia coli (strain K12)
Q8YDG6 3.66e-12 72 21 20 540 3 BMEII0210 Putative peptide-binding periplasmic protein BMEII0210 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P18791 3.81e-12 72 35 5 136 1 amiA Oligopeptide-binding protein AmiA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
A9CIN5 1.7e-08 60 24 12 323 3 yepA Peptidoglycan-binding protein YepA Agrobacterium fabrum (strain C58 / ATCC 33970)
P66772 4.05e-08 59 22 22 472 3 BQ2027_MB1311C Uncharacterized protein Mb1311c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WGU5 4.05e-08 59 22 22 472 1 Rv1280c Uncharacterized protein Rv1280c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGU4 4.05e-08 59 22 22 472 3 MT1317 Uncharacterized protein MT1317 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q2FVE7 5.72e-08 59 21 18 494 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain NCTC 8325 / PS 47)
A0A0H3JTL0 3.53e-07 56 21 18 494 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q9X4Y1 4.33e-07 56 23 13 359 2 agpA Periplasmic alpha-galactoside-binding protein Rhizobium meliloti (strain 1021)
Q8YC41 4.57e-07 56 27 11 253 3 BMEII0691 Putative binding protein BMEII0691 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YKJ5 4.65e-07 56 27 11 253 3 BAB2_0664 Putative binding protein BAB2_0664 Brucella abortus (strain 2308)
Q577X5 4.65e-07 56 27 11 253 3 BruAb2_0648 Putative binding protein BruAb2_0648 Brucella abortus biovar 1 (strain 9-941)
Q8FW84 4.73e-07 56 27 11 253 3 BRA0576 Putative binding protein BRA0576/BS1330_II0571 Brucella suis biovar 1 (strain 1330)
P42061 5.27e-06 52 19 13 461 1 appA Oligopeptide-binding protein AppA Bacillus subtilis (strain 168)
P55691 0.000126 48 20 22 508 3 NGR_a00920 Uncharacterized protein y4wM Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q9RU24 0.00061 46 21 17 385 1 DR_1571 Probable ABC transporter-binding protein DR_1571 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
P55669 0.001 45 20 16 429 3 NGR_a01440 Probable peptide ABC transporter periplasmic-binding protein y4tO Sinorhizobium fredii (strain NBRC 101917 / NGR234)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05755
Feature type CDS
Gene -
Product ABC transporter substrate-binding protein
Location 1222185 - 1223816 (strand: -1)
Length 1632 (nucleotides) / 543 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_9
Orthogroup size 21
N. genomes 7

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Genomic region

Domains

PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4166 Amino acid transport and metabolism (E) E ABC-type oligopeptide transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K15580 oligopeptide transport system substrate-binding protein beta-Lactam resistance
ABC transporters
Quorum sensing		 -

Protein Sequence

MKKNVIAVSLTPALLLSLFAYPASAAQVPAGTKLAVKQEIVINNGSEPVSLDPHKVEGVPESNIILNLLEGLVSTDADGKIVPGVAQSWSSPDNRTWTFILYPDAKWSDGSPVTANDFVYSWRRLVDPKTASPYGSYLHYAYVENVDEILKGTKSPDTLGVKALDDHTLQVQLTQPVPYFVDMLSHTALKPVPKGAIDQFGDKWTAVGKFTGNGAYTLSSWNVNERLVLKRNPKYRNDKETVIEQATFLPLQSETSDINRYRAGEIDITNSAVPPVLFSKLKKDIPAEVHISPYLCTFYYEINNSATSFTDPRVREAIKLGIDRDIITNKIMGQGQIPAYGFTPHYINGGDFITPDWASQTQAQRNEKGRKLLEEAGFSEKSPLTFELLYNTSDQNKQQAIAAASMWNKNLGVNVVLKNQEWKTSNQNRHEGNYQVARATWCADYNEPSSFLNIFLSDSSNNTSFYRNATFDSAMQRALLATDEKTRQSAYQQAEMQLDQDSALIPVYYRVSVRLIKPAVGGFTGNDPLDYMDIKRLYMVETY

Flanking regions ( +/- flanking 50bp)

TTTAATCACGTTGTTTGTCTAATTGGTGTTATTCAGACCGGGACGGAAAAATGAAAAAAAACGTTATTGCTGTTTCCCTCACCCCCGCGTTGTTGCTGAGCCTTTTTGCGTATCCTGCATCAGCGGCACAGGTGCCTGCCGGAACAAAACTGGCTGTAAAACAAGAGATTGTTATTAATAACGGCAGTGAACCTGTATCACTGGATCCGCATAAAGTGGAAGGTGTGCCGGAGTCCAATATTATTCTTAACCTGCTGGAAGGTCTGGTTTCCACAGATGCGGACGGAAAAATAGTGCCGGGTGTGGCGCAGAGCTGGTCATCACCGGATAACCGGACCTGGACATTTATATTATATCCGGATGCAAAATGGAGTGACGGCTCGCCTGTCACCGCCAATGATTTTGTCTATAGCTGGCGGCGGCTGGTGGATCCGAAAACCGCATCGCCTTACGGCAGTTATCTGCATTATGCCTACGTCGAAAACGTGGATGAGATCCTCAAAGGTACAAAATCACCGGATACACTCGGCGTGAAAGCATTGGATGACCATACTTTGCAGGTGCAGCTGACACAACCGGTACCGTATTTTGTTGATATGCTCAGCCATACGGCACTGAAACCGGTGCCCAAGGGCGCGATTGACCAGTTTGGTGATAAATGGACGGCTGTCGGAAAATTTACCGGCAATGGCGCATATACCTTGTCATCATGGAATGTGAACGAGCGCCTGGTGCTGAAACGCAATCCGAAATACCGCAATGATAAAGAAACAGTGATTGAGCAGGCGACCTTTTTGCCGTTGCAATCAGAAACCAGTGATATTAACCGGTACCGCGCCGGTGAGATTGATATTACTAACAGTGCCGTGCCGCCGGTCTTATTCAGTAAGCTGAAAAAAGATATCCCGGCAGAGGTTCATATTTCCCCTTACCTGTGTACGTTTTATTACGAAATCAATAATTCAGCCACCTCATTTACCGATCCCCGTGTCCGGGAAGCCATCAAGCTGGGCATTGATCGCGATATTATTACCAATAAAATCATGGGGCAGGGGCAGATTCCTGCATACGGTTTTACGCCACATTATATTAACGGCGGAGACTTTATTACCCCGGACTGGGCATCCCAGACGCAGGCTCAGCGTAATGAAAAGGGACGAAAACTGCTGGAAGAAGCCGGTTTCAGTGAGAAAAGCCCGCTGACCTTCGAATTGCTCTATAACACGTCTGATCAGAACAAACAGCAGGCGATTGCTGCCGCATCCATGTGGAATAAAAACCTCGGGGTGAATGTGGTGCTGAAAAACCAGGAATGGAAAACATCGAATCAAAATCGCCACGAGGGTAACTATCAGGTCGCGCGGGCTACCTGGTGCGCGGATTACAATGAACCTTCTTCGTTTTTGAATATTTTCCTGTCAGACAGCAGTAATAACACCAGTTTCTATCGTAATGCCACTTTTGACAGTGCAATGCAGCGCGCATTACTGGCAACCGATGAAAAAACGCGCCAATCCGCTTACCAGCAGGCAGAAATGCAGTTAGATCAGGACTCTGCATTGATCCCTGTCTATTATCGCGTGAGTGTGCGGTTGATAAAACCAGCAGTTGGCGGGTTTACCGGTAATGACCCGCTTGATTATATGGATATTAAGCGCTTATATATGGTAGAAACGTATTAATAATAAAAATTTGCACGCTAATAAGTAGTGCGAAAACAATAAAGGCATGA