Homologs in group_39

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00755 FBDBKF_00755 43.8 Morganella morganii S1 - Lipoprotein
FBDBKF_01755 FBDBKF_01755 85.6 Morganella morganii S1 - DUF5339 domain-containing protein
EHELCC_00790 EHELCC_00790 43.8 Morganella morganii S2 - Lipoprotein
EHELCC_02225 EHELCC_02225 85.6 Morganella morganii S2 - DUF5339 domain-containing protein
NLDBIP_01235 NLDBIP_01235 85.6 Morganella morganii S4 - DUF5339 domain-containing protein
NLDBIP_02670 NLDBIP_02670 43.8 Morganella morganii S4 - Lipoprotein
LHKJJB_00800 LHKJJB_00800 85.6 Morganella morganii S3 - DUF5339 domain-containing protein
LHKJJB_04185 LHKJJB_04185 43.8 Morganella morganii S3 - Lipoprotein
HKOGLL_00840 HKOGLL_00840 85.6 Morganella morganii S5 - DUF5339 domain-containing protein
HKOGLL_02860 HKOGLL_02860 43.8 Morganella morganii S5 - Lipoprotein
F4V73_RS06755 F4V73_RS06755 42.4 Morganella psychrotolerans - DUF5339 domain-containing protein
PMI_RS04815 PMI_RS04815 38.0 Proteus mirabilis HI4320 - DUF5339 domain-containing protein
PMI_RS14080 PMI_RS14080 22.0 Proteus mirabilis HI4320 - DUF5339 family protein

Distribution of the homologs in the orthogroup group_39

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_39

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43982 5.32e-05 41 32 3 99 3 HI_0310 Uncharacterized protein HI_0310 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04085
Feature type CDS
Gene -
Product DUF5339 domain-containing protein
Location 865483 - 865776 (strand: -1)
Length 294 (nucleotides) / 97 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_39
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF17274 Family of unknown function (DUF5339)

Protein Sequence

MKKLTLISLGCLFSLTAFAANASNVCNEYFTEIDGMVKLAEQEAKGNADATAQVNAMKQQLVTAKTQIQSVPQETQDMACQQGLDALKEFKAAADKQ

Flanking regions ( +/- flanking 50bp)

GTGACTAATTATTCATACTTGCCCACCCTACCTACAATATAAGGCTTATAATGAAAAAACTGACGTTAATTTCCCTGGGATGCCTGTTTTCTTTGACCGCATTTGCGGCAAATGCAAGCAATGTGTGTAATGAGTACTTCACCGAGATAGACGGTATGGTGAAACTCGCAGAGCAGGAAGCGAAAGGGAATGCCGATGCCACTGCACAGGTGAATGCAATGAAACAACAGCTTGTGACAGCCAAAACACAGATCCAATCTGTCCCGCAGGAAACACAGGATATGGCATGTCAGCAAGGGCTGGATGCATTAAAGGAATTCAAAGCCGCAGCAGATAAACAGTAATTGTCCTCTGTTTGACCTTGTAAATAATTCTGTTGTATTGAAAGAGGCCC