Orthogroup:group_39


Homologs in group_39

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00755 FBDBKF_00755 Morganella morganii S1 - Lipoprotein
FBDBKF_01755 FBDBKF_01755 Morganella morganii S1 - DUF5339 domain-containing protein
EHELCC_00790 EHELCC_00790 Morganella morganii S2 - Lipoprotein
EHELCC_02225 EHELCC_02225 Morganella morganii S2 - DUF5339 domain-containing protein
NLDBIP_01235 NLDBIP_01235 Morganella morganii S4 - DUF5339 domain-containing protein
NLDBIP_02670 NLDBIP_02670 Morganella morganii S4 - Lipoprotein
LHKJJB_00800 LHKJJB_00800 Morganella morganii S3 - DUF5339 domain-containing protein
LHKJJB_04185 LHKJJB_04185 Morganella morganii S3 - Lipoprotein
HKOGLL_00840 HKOGLL_00840 Morganella morganii S5 - DUF5339 domain-containing protein
HKOGLL_02860 HKOGLL_02860 Morganella morganii S5 - Lipoprotein
F4V73_RS04085 F4V73_RS04085 Morganella psychrotolerans - DUF5339 domain-containing protein
F4V73_RS06755 F4V73_RS06755 Morganella psychrotolerans - DUF5339 domain-containing protein
PMI_RS04815 PMI_RS04815 Proteus mirabilis HI4320 - DUF5339 domain-containing protein
PMI_RS14080 PMI_RS14080 Proteus mirabilis HI4320 - DUF5339 family protein

Distribution of group_39 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_39 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_39

Orthogroup content: 14 members

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This page summarizes the annotation of all members of the orthologous group group_39.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 14

Product

# Product Occurence
1 Lipoprotein 5
2 DUF5339 domain-containing protein 8
3 DUF5339 family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1464 5 P Inorganic ion transport and metabolism (P) ABC-type metal ion transport system, periplasmic component/surface antigen
COG4607 1 P Inorganic ion transport and metabolism (P) ABC-type enterochelin transport system, periplasmic component

Pfam domain Annotation(s)

Domain ID Occurences Description
PF17274 14 Family of unknown function (DUF5339)

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein HI_0310 1

Protein length

Min length 93
Max length 107
Mean length (sd) 100.9 (5.2)
Median length 98.5

Protein length distribution