Homologs in group_2437

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19920 FBDBKF_19920 22.5 Morganella morganii S1 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
EHELCC_07695 EHELCC_07695 22.5 Morganella morganii S2 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
NLDBIP_08020 NLDBIP_08020 22.5 Morganella morganii S4 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
LHKJJB_06245 LHKJJB_06245 22.5 Morganella morganii S3 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
HKOGLL_19100 HKOGLL_19100 22.5 Morganella morganii S5 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
F4V73_RS06245 F4V73_RS06245 28.6 Morganella psychrotolerans - S24 family peptidase

Distribution of the homologs in the orthogroup group_2437

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2437

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75974 2.57e-61 194 43 1 220 4 cohE Prophage repressor CohE Escherichia coli (strain K12)
P69202 1.73e-09 58 34 3 99 1 C2 Repressor protein C2 Salmonella phage P22
Q79S39 2.42e-07 53 29 3 133 4 s087 HTH-type transcriptional regulator for conjugative element SXT Vibrio cholerae
Q8GJK1 2.42e-07 53 29 3 133 4 None HTH-type transcriptional regulator for conjugative element pMERPH Shewanella putrefaciens
Q79RI9 2.42e-07 53 29 3 133 4 ORF-96 HTH-type transcriptional regulator for conjugative element R391 Providencia rettgeri
Q83BT6 9.89e-05 45 24 0 109 1 CBU_1416 Uncharacterized HTH-type transcriptional regulator CBU_1416 Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
P03034 0.000429 43 22 5 171 1 cI Repressor protein cI Escherichia phage lambda

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02025
Feature type CDS
Gene -
Product S24 family peptidase
Location 437960 - 438631 (strand: -1)
Length 672 (nucleotides) / 223 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2437
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF00717 Peptidase S24-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1974 Transcription (K)
Signal transduction mechanisms (T)		 KT SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)

Protein Sequence

MDMKTIDQIRADNTRTLRDAIGGNTAFSARINREPTQVSRLIGINPTKRIGNTIARHIEECFDLVTGWLDQEHPEKIQSNDEYITPLNHLKIRHVPLLTRQQAATASTTKSTAAHNNHGEYYACPVPCGKNTFALAVTGDAMAPDYTSGEIAFIDPNISPSEGDTVLACSAGNGEIIFRQFMNDGYTAILKSVNPDWPNQYIEITDNIELMGTVIISFKIRKK

Flanking regions ( +/- flanking 50bp)

GGAAGTGTACCAACAAGAAACTTGTTACTAAAAGGTACATATTTTTAATTATGGATATGAAAACAATTGATCAGATCAGAGCCGATAACACACGCACTCTCCGTGATGCCATCGGCGGAAATACTGCATTTTCAGCAAGGATAAACCGCGAACCAACACAGGTAAGCCGCCTGATCGGTATCAATCCGACAAAAAGAATCGGAAACACGATAGCGCGGCATATTGAGGAATGTTTTGACTTAGTCACCGGTTGGTTAGATCAGGAGCATCCTGAAAAAATTCAATCGAATGATGAATATATAACCCCGCTGAATCATCTTAAAATCAGGCATGTCCCGCTGCTGACCCGGCAGCAGGCAGCTACAGCCTCAACGACAAAAAGCACCGCTGCGCACAATAATCACGGGGAATACTATGCCTGCCCGGTTCCCTGCGGAAAAAACACCTTTGCGCTGGCGGTAACCGGGGATGCAATGGCACCGGATTACACCAGTGGAGAAATTGCGTTTATTGATCCCAATATATCCCCCTCAGAGGGCGATACTGTTCTTGCCTGTTCAGCCGGAAACGGCGAGATTATTTTCCGGCAGTTTATGAATGATGGCTATACAGCGATACTGAAATCCGTTAATCCGGATTGGCCTAATCAATATATTGAAATAACAGATAATATTGAATTAATGGGTACAGTCATAATTTCATTTAAAATTAGAAAAAAATAATCTTAAAATTCAATTAGTAACCCTTTCACTAACATGTAAGGGTTATTTTG