Orthogroup:group_72


Homologs in group_72

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18735 FBDBKF_18735 Morganella morganii S1 lexA LexA family transcriptional regulator
FBDBKF_19920 FBDBKF_19920 Morganella morganii S1 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
EHELCC_07695 EHELCC_07695 Morganella morganii S2 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
EHELCC_15310 EHELCC_15310 Morganella morganii S2 lexA LexA family transcriptional regulator
NLDBIP_08020 NLDBIP_08020 Morganella morganii S4 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
NLDBIP_15840 NLDBIP_15840 Morganella morganii S4 lexA LexA family transcriptional regulator
LHKJJB_06245 LHKJJB_06245 Morganella morganii S3 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
LHKJJB_16000 LHKJJB_16000 Morganella morganii S3 lexA LexA family transcriptional regulator
HKOGLL_15120 HKOGLL_15120 Morganella morganii S5 lexA LexA family transcriptional regulator
HKOGLL_19100 HKOGLL_19100 Morganella morganii S5 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
F4V73_RS02025 F4V73_RS02025 Morganella psychrotolerans - S24 family peptidase
F4V73_RS06245 F4V73_RS06245 Morganella psychrotolerans - S24 family peptidase
PMI_RS11985 PMI_RS11985 Proteus mirabilis HI4320 - LexA family transcriptional regulator

Distribution of group_72 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_72 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_72

Orthogroup content: 13 members

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This page summarizes the annotation of all members of the orthologous group group_72.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lexA 10
2 - 3

Product

# Product Occurence
1 LexA family transcriptional regulator 6
2 SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase) 5
3 S24 family peptidase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1974 13 KT Transcription (K)
Signal transduction mechanisms (T)		 SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00717 13 Peptidase S24-like
PF01381 12 Helix-turn-helix

Annotations of the 169 SwissProt hits

Annotation Number of occurrences
26 kDa repressor protein 1
HTH-type transcriptional regulator DicA 1
HTH-type transcriptional regulator PrtR 1
HTH-type transcriptional regulator RdgA 1
HTH-type transcriptional regulator Xre 1
HTH-type transcriptional regulator for conjugative element R391 1
HTH-type transcriptional regulator for conjugative element SXT 1
HTH-type transcriptional regulator for conjugative element pMERPH 1
LexA repressor 142
LexA repressor 1 7
LexA repressor 2 2
Prophage repressor CohE 1
Protein MucA 2
Regulatory protein cro 1
Repressor protein C 1
Repressor protein C2 1
Repressor protein CI 1
Repressor protein CI (Fragment) 1
Repressor protein cI 1
Uncharacterized HTH-type transcriptional regulator CBU_1416 1

Protein length

Min length 210
Max length 235
Mean length (sd) 222.2 (11.7)
Median length 223.0

Protein length distribution