Homologs in group_3083

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18865 FBDBKF_18865 100.0 Morganella morganii S1 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase
NLDBIP_18440 NLDBIP_18440 100.0 Morganella morganii S4 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase
LHKJJB_09185 LHKJJB_09185 100.0 Morganella morganii S3 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase
HKOGLL_08735 HKOGLL_08735 100.0 Morganella morganii S5 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase
F4V73_RS13730 F4V73_RS13730 95.4 Morganella psychrotolerans - sirohydrochlorin cobaltochelatase

Distribution of the homologs in the orthogroup group_3083

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3083

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q05592 2.53e-127 364 66 0 257 1 cbiK Sirohydrochlorin cobaltochelatase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q72EC8 1.01e-42 150 36 4 255 1 cbiKp Sirohydrochlorin cobaltochelatase CbiKP Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
Q72CB8 1.75e-30 117 32 4 254 1 cbiKc Sirohydrochlorin cobaltochelatase CbiKC Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_17060
Feature type CDS
Gene cbiK
Product Cobalamin biosynthesis protein CbiK, Co2+ chelatase
Location 17876 - 18658 (strand: -1)
Length 783 (nucleotides) / 260 (amino acids)

Contig

Accession ZDB_231
Length 52966 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3083
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF06180 Cobalt chelatase (CbiK)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4822 Coenzyme transport and metabolism (H) H Cobalamin biosynthesis protein CbiK, Co2+ chelatase

Kegg Ortholog Annotation(s)

Protein Sequence

MKKALLVISFGTSYAETREKNIESCEKQLAAAFPGRDFFRAFTSGMIIRKLKERDNLHINNPEEALRHLHEQGYEDVAIQSLHVINGDEYEKIVGQVEKYRPFFRYLRVGKPLLSSFEDYSQLIDALHFQMPELKADERVVFMGHGATHHAFSAYACLDHMMTNSGFPGRVGAVESYPEIDLIIKGLKAENVRKVHLMPLMLVAGDHAINDMASDEEDSWKTQLEQAGIEATAWLQGMGENNMIRQMFVEHLAQTMDNGE

Flanking regions ( +/- flanking 50bp)

CAGTATCTGACATCCCGTTTTTCTGTCTGTTGATTTACTGAGGTTATGAGATGAAAAAAGCGTTATTAGTGATTAGTTTCGGCACCAGTTACGCGGAAACCCGTGAAAAAAATATCGAAAGCTGTGAAAAGCAGCTTGCGGCAGCGTTCCCCGGCCGTGATTTTTTCCGCGCCTTCACCTCCGGCATGATTATCCGCAAATTAAAAGAGCGCGATAACCTGCATATCAATAACCCTGAAGAGGCATTACGCCATCTGCACGAGCAGGGTTATGAGGATGTGGCTATCCAGTCACTGCATGTGATTAACGGGGACGAATACGAAAAGATTGTCGGCCAGGTTGAAAAATACCGTCCGTTTTTCCGCTATCTGCGCGTGGGCAAACCGCTGCTGAGCAGTTTTGAGGATTACTCACAGCTGATTGATGCCCTGCACTTCCAGATGCCGGAACTGAAAGCCGACGAGCGGGTGGTCTTTATGGGTCACGGTGCCACTCACCATGCCTTCTCCGCTTATGCCTGCCTGGATCATATGATGACCAACAGCGGCTTCCCGGGACGTGTCGGGGCGGTGGAGAGCTATCCGGAAATCGACCTGATTATTAAAGGTCTGAAAGCCGAAAACGTCCGCAAAGTACACCTGATGCCGCTGATGCTGGTCGCCGGTGACCATGCCATCAATGATATGGCCTCCGATGAAGAAGATTCCTGGAAAACACAGCTGGAACAGGCCGGAATCGAGGCTACCGCATGGTTACAGGGCATGGGTGAGAACAATATGATCCGTCAGATGTTTGTCGAACACCTGGCGCAGACAATGGATAACGGGGAGTAATATCCGCACATGAGTCAGCAAACAGAAAAACCACAGGGCAGACTTTACGC