Homologs in group_3083

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18865 FBDBKF_18865 95.4 Morganella morganii S1 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase
EHELCC_17060 EHELCC_17060 95.4 Morganella morganii S2 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase
NLDBIP_18440 NLDBIP_18440 95.4 Morganella morganii S4 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase
LHKJJB_09185 LHKJJB_09185 95.4 Morganella morganii S3 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase
HKOGLL_08735 HKOGLL_08735 95.4 Morganella morganii S5 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase

Distribution of the homologs in the orthogroup group_3083

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3083

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q05592 1.88e-127 365 66 0 259 1 cbiK Sirohydrochlorin cobaltochelatase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q72EC8 6.42e-44 153 37 4 255 1 cbiKp Sirohydrochlorin cobaltochelatase CbiKP Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
Q72CB8 1.4e-33 125 32 4 258 1 cbiKc Sirohydrochlorin cobaltochelatase CbiKC Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13730
Feature type CDS
Gene -
Product sirohydrochlorin cobaltochelatase
Location 381216 - 381998 (strand: 1)
Length 783 (nucleotides) / 260 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3083
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF06180 Cobalt chelatase (CbiK)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4822 Coenzyme transport and metabolism (H) H Cobalamin biosynthesis protein CbiK, Co2+ chelatase

Kegg Ortholog Annotation(s)

Protein Sequence

MKKALLVISFGTSYAETREKNIESCEKQLAAAFPGRDFFRAFTSGMIIRKLKARDNLHIDNPEEALRHLHEQGYEDVAIQSLHVINGDEYEKIVSQVEKYRPFFRYLRVGKPLLSSFDDYSQLIDALHFQMPELKDDERVVFMGHGASHHAFSAYACLDHMMTNSGFPGRVGAVESYPEIDLIIKGLKADNIRKVHLMPLMLVAGDHAINDMASDEEDSWRTQLEQAGIEAVPWLQGMGENNMIRQMFVEHLAQTMDNAE

Flanking regions ( +/- flanking 50bp)

CAGTACTTGGTATCCCGTTTTTCTGTCTGTTGATTTACTGAGGTTATGAGATGAAAAAAGCGTTATTAGTGATTAGTTTCGGCACCAGTTACGCGGAAACCCGGGAAAAAAATATTGAAAGCTGTGAAAAACAGCTCGCGGCAGCGTTTCCCGGCCGTGATTTTTTCCGTGCCTTTACGTCCGGTATGATTATCCGCAAATTAAAAGCGCGCGATAACCTGCATATCGATAACCCCGAAGAAGCACTGCGCCACCTGCACGAGCAGGGTTATGAAGATGTGGCGATACAATCGCTGCATGTGATTAATGGTGATGAATACGAAAAAATTGTCAGTCAGGTCGAAAAATACCGTCCGTTCTTCCGTTATCTGCGCGTGGGTAAACCCCTGCTGAGCAGCTTTGACGATTACTCACAACTGATTGATGCCCTGCATTTCCAGATGCCGGAACTCAAAGACGACGAGCGCGTGGTCTTTATGGGGCACGGTGCCTCGCACCATGCGTTCTCCGCATACGCCTGCCTTGATCACATGATGACCAACAGCGGTTTTCCGGGTCGTGTCGGTGCCGTCGAAAGCTATCCGGAAATTGATTTAATTATCAAAGGTCTGAAAGCTGACAATATCCGTAAAGTGCATCTGATGCCGCTGATGCTGGTGGCCGGTGATCATGCCATTAACGACATGGCGTCTGATGAAGAAGATTCATGGCGCACACAGCTTGAGCAGGCCGGTATTGAAGCTGTGCCATGGTTACAGGGCATGGGCGAAAACAACATGATCCGCCAGATGTTTGTCGAACATCTCGCACAAACAATGGATAACGCGGAGTAAGGTCCTTACATACATGAGCGAACAAACAGAACAACCACAGGGCAGACTCT