COG4822


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4822, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Cobalamin biosynthesis protein CbiK, Co2+ chelatase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG4822 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3083 FBDBKF_18865 17875 18657 -1 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase Morganella morganii S1
1 group_3083 EHELCC_17060 17876 18658 -1 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase Morganella morganii S2
2 group_3083 NLDBIP_18440 17875 18657 -1 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase Morganella morganii S4
3 group_3083 LHKJJB_09185 173672 174454 1 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase Morganella morganii S3
4 group_3083 HKOGLL_08735 173672 174454 1 cbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase Morganella morganii S5
5 group_3083 F4V73_RS13730 381216 381998 1 sirohydrochlorin cobaltochelatase Morganella psychrotolerans