Homologs in group_2175

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6 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16360 FBDBKF_16360 100.0 Morganella morganii S1 - UDP-glucose 4-epimerase
NLDBIP_16945 NLDBIP_16945 100.0 Morganella morganii S4 - UDP-glucose 4-epimerase
LHKJJB_16865 LHKJJB_16865 100.0 Morganella morganii S3 - UDP-glucose 4-epimerase
HKOGLL_16975 HKOGLL_16975 100.0 Morganella morganii S5 - UDP-glucose 4-epimerase
F4V73_RS16250 F4V73_RS16250 29.9 Morganella psychrotolerans - NAD(P)-dependent oxidoreductase
F4V73_RS17215 F4V73_RS17215 95.9 Morganella psychrotolerans - NAD-dependent epimerase/dehydratase family protein

Distribution of the homologs in the orthogroup group_2175

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2175

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8X7P7 1.02e-106 317 48 4 316 1 gnu N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase Escherichia coli O157:H7
Q56623 3.09e-20 92 25 11 325 3 galE UDP-glucose 4-epimerase Vibrio cholerae
P55579 2.18e-15 79 28 10 250 3 NGR_a02350 Uncharacterized protein y4nG Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P53199 1.11e-14 77 27 17 347 1 ERG26 Sterol-4-alpha-carboxylate 3-dehydrogenase ERG26, decarboxylating Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q5A1B0 1.13e-14 77 28 18 345 1 ERG26 Sterol-4-alpha-carboxylate 3-dehydrogenase ERG26, decarboxylating Candida albicans (strain SC5314 / ATCC MYA-2876)
P55584 4.03e-14 75 22 7 257 3 NGR_a02300 Uncharacterized protein y4nL Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q15738 2.88e-13 73 25 6 259 1 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Homo sapiens
Q3ZBE9 4.49e-13 72 28 5 203 2 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Bos taurus
Q5PPL3 8.46e-13 71 25 8 262 2 Nsdhl Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Rattus norvegicus
B2FI29 6.92e-12 68 23 14 331 1 oleD 2-alkyl-3-oxoalkanoate reductase Stenotrophomonas maltophilia (strain K279a)
Q9R1J0 1.12e-11 68 24 9 277 1 Nsdhl Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Mus musculus
Q54L85 1.73e-11 67 24 8 245 3 nsdhl Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Dictyostelium discoideum
Q9FX01 1.02e-10 65 23 15 348 1 3BETAHSD/D1 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 Arabidopsis thaliana
B0M3E8 3.11e-10 63 28 8 213 1 UGE1 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 Pisum sativum
Q652A8 5.17e-10 63 27 9 213 2 UGE-3 UDP-glucose 4-epimerase 3 Oryza sativa subsp. japonica
Q8PDW5 7.8e-10 62 22 10 327 1 oleD 2-alkyl-3-oxoalkanoate reductase Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Q67ZE1 1.04e-09 62 23 14 347 1 3BETAHSD/D2 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 Arabidopsis thaliana
H1ZZB0 1.24e-09 62 21 7 315 1 auaH Aurachin B dehydrogenase Stigmatella aurantiaca
Q43070 1.87e-09 61 27 8 213 2 GALE UDP-glucose 4-epimerase Pisum sativum
Q42605 2.47e-09 61 27 8 213 1 UGE1 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 Arabidopsis thaliana
Q8EG63 6.59e-09 60 24 16 340 1 oleD 2-alkyl-3-oxoalkanoate reductase Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
P22715 9.21e-09 59 26 17 305 3 galE UDP-glucose 4-epimerase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q56093 1.37e-08 58 26 17 305 3 galE UDP-glucose 4-epimerase Salmonella typhi
P0DX24 2.31e-08 58 26 8 214 1 MN2019_09805 3-beta-hydroxysteroid dehydrogenase Mycolicibacterium neoaurum
P21977 3.68e-08 57 25 13 288 3 galE UDP-glucose 4-epimerase Streptococcus thermophilus
P09147 5.38e-08 57 26 16 304 1 galE UDP-glucose 4-epimerase Escherichia coli (strain K12)
Q6K2E1 6.68e-08 57 26 7 216 2 UGE-4 UDP-glucose 4-epimerase 4 Oryza sativa subsp. japonica
O34886 1.13e-07 55 25 9 226 3 ytcB Uncharacterized UDP-glucose epimerase YtcB Bacillus subtilis (strain 168)
Q6ZDJ7 2.94e-07 55 27 9 211 2 UGE-2 UDP-glucose 4-epimerase 2 Oryza sativa subsp. japonica
Q9EQC1 2.98e-07 55 24 11 278 1 Hsd3b7 3 beta-hydroxysteroid dehydrogenase type 7 Mus musculus
O65781 3.78e-07 54 27 8 211 2 None UDP-glucose 4-epimerase GEPI48 Cyamopsis tetragonoloba
Q9SN58 4.5e-07 54 27 9 211 1 UGE5 UDP-glucose 4-epimerase 5 Arabidopsis thaliana
O65780 5.25e-07 54 26 7 223 2 None UDP-glucose 4-epimerase GEPI42 Cyamopsis tetragonoloba
Q7WTB1 6.11e-07 53 25 16 307 2 galE UDP-glucose 4-epimerase Lactobacillus helveticus
Q9SYM5 9.76e-07 53 26 11 263 1 RHM1 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 Arabidopsis thaliana
Q9T0A7 1.04e-06 53 26 8 211 1 UGE2 UDP-glucose 4-epimerase 2 Arabidopsis thaliana
Q8LDN8 1.05e-06 53 25 8 213 1 UGE3 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3 Arabidopsis thaliana
Q9LPG6 1.15e-06 53 27 13 269 1 RHM2 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 Arabidopsis thaliana
Q8H930 2.58e-06 52 23 7 190 2 UEL-1 Probable UDP-arabinose 4-epimerase 1 Oryza sativa subsp. japonica
Q8H0B2 6.02e-06 51 24 6 190 2 UEL-3 Probable UDP-arabinose 4-epimerase 3 Oryza sativa subsp. japonica
D4GU72 6.08e-06 50 24 9 264 3 agl12 Low-salt glycan biosynthesis protein Agl12 Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
Q9JRN7 8.27e-06 50 29 8 168 1 tld GDP-6-deoxy-D-talose 4-dehydrogenase Aggregatibacter actinomycetemcomitans
Q8LNZ3 8.72e-06 50 25 9 211 2 UGE-1 UDP-glucose 4-epimerase 1 Oryza sativa subsp. japonica
P9WQP7 8.8e-06 50 25 8 216 1 Rv1106c 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQP6 8.8e-06 50 25 8 216 3 MT1137 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q05026 1.16e-05 50 24 13 292 3 galE UDP-glucose 4-epimerase Neisseria gonorrhoeae
P96995 1.71e-05 49 26 7 181 3 galE UDP-glucose 4-epimerase Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
P55180 2.54e-05 48 25 8 251 3 galE UDP-glucose 4-epimerase Bacillus subtilis (strain 168)
Q59083 3.08e-05 48 26 6 164 3 exoB UDP-glucose 4-epimerase Azospirillum brasilense
P75821 3.34e-05 48 20 7 245 3 ybjS Uncharacterized protein YbjS Escherichia coli (strain K12)
C4K8I6 3.45e-05 48 26 10 221 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)
P73212 4.4e-05 48 24 5 172 3 dfrA Putative dihydroflavonol 4-reductase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O43050 4.87e-05 48 24 18 339 3 erg26 Sterol-4-alpha-carboxylate 3-dehydrogenase erg26, decarboxylating Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P48279 6.11e-05 47 28 3 110 3 ycf39 Photosystem II assembly factor Ycf39 Cyanophora paradoxa
Q8WUS8 7.71e-05 47 22 8 218 1 SDR42E1 Short-chain dehydrogenase/reductase family 42E member 1 Homo sapiens
Q3T105 0.000101 47 26 10 229 2 GALE UDP-glucose 4-epimerase Bos taurus
Q9FI17 0.000114 47 22 7 189 3 At5g44480 Putative UDP-arabinose 4-epimerase 4 Arabidopsis thaliana
Q9LH76 0.000182 46 26 12 246 2 RHM3 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 Arabidopsis thaliana
P13226 0.00025 45 25 5 149 3 galE UDP-glucose 4-epimerase Streptomyces lividans
Q9F7D4 0.000279 45 24 9 216 3 galE UDP-glucose 4-epimerase Yersinia pestis
P18645 0.000354 45 26 11 223 2 Gale UDP-glucose 4-epimerase Rattus norvegicus
Q8VDR7 0.000363 45 24 12 237 2 Tgds dTDP-D-glucose 4,6-dehydratase Mus musculus
Q54WS6 0.000396 45 24 9 235 3 tgds dTDP-D-glucose 4,6-dehydratase Dictyostelium discoideum
Q8R059 0.000493 45 27 11 229 1 Gale UDP-glucose 4-epimerase Mus musculus
O84903 0.000539 44 25 16 306 3 galE UDP-glucose 4-epimerase Lacticaseibacillus casei
Q32L94 0.000565 45 22 8 218 2 SDR42E1 Short-chain dehydrogenase/reductase family 42E member 1 Bos taurus
Q9C7W7 0.000585 44 25 8 212 1 UGE4 UDP-glucose 4-epimerase 4 Arabidopsis thaliana
P26503 0.000759 44 28 5 148 3 exoB UDP-glucose 4-epimerase Rhizobium meliloti (strain 1021)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_16395
Feature type CDS
Gene -
Product UDP-glucose 4-epimerase
Location 59123 - 60073 (strand: -1)
Length 951 (nucleotides) / 316 (amino acids)

Contig

Accession ZDB_228
Length 65335 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2175
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF01370 NAD dependent epimerase/dehydratase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0451 Cell wall/membrane/envelope biogenesis (M) M Nucleoside-diphosphate-sugar epimerase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19997 GlcNAc-P-P-Und epimerase [EC:5.1.3.26] - -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG019018 NAD-dependent epimerase/dehydratase family protein VF0392 Immune modulation

Protein Sequence

MIIIIGGSGFIGTRLSTQLQKDNIPFKIVDIEKSAAFPDHWEFGDVTKPESLVEPLTGSDVIINLAAKHKDNVHPISLYYDVNVDGAKHVCDVAAQLGIKHIVFTSSVAVYGFVEKETGEDGQYEPFNDYGKSKLAAEHVYDAWQAEEADRTLVTIRPTVVFGENNRGNVYNLFRQIASGRFLMIGGGKNQKSMAYVENIAAFLKFATTFNSGRHVFNYVDKPDFNMEDLTDIICKAMDKHKSNIHVPYSVGLLGGYCFDILAKVTGKEFPISSIRIKKFCARTQFKSDFIADTGFVAPVSLEQGIANTVRHEFKK

Flanking regions ( +/- flanking 50bp)

CAATCTCTCATTAAAAAAATATTGAAACGATAAAATTACCCGGAGTTAAAATGATCATCATTATCGGCGGCTCAGGCTTCATTGGTACTCGCCTGTCCACACAATTACAAAAAGACAATATCCCGTTCAAAATCGTTGATATTGAGAAAAGTGCTGCATTTCCTGATCATTGGGAATTTGGGGACGTCACTAAACCGGAATCTCTGGTTGAGCCACTGACAGGTTCCGACGTTATTATTAATCTGGCTGCAAAGCACAAAGATAATGTGCATCCTATCAGTCTTTACTATGATGTAAATGTCGATGGCGCTAAACATGTATGTGATGTCGCAGCTCAGCTTGGAATCAAACATATCGTCTTTACATCTTCTGTTGCCGTTTACGGTTTTGTTGAAAAAGAAACCGGTGAAGATGGTCAATATGAGCCATTCAATGATTACGGTAAATCCAAATTAGCTGCCGAACATGTTTATGATGCCTGGCAGGCAGAAGAAGCAGATCGCACACTGGTGACAATCCGCCCGACTGTAGTATTTGGTGAAAACAACCGTGGCAATGTCTATAATTTATTCCGCCAGATTGCATCCGGTCGTTTCCTGATGATTGGTGGCGGTAAAAACCAAAAATCAATGGCTTATGTTGAAAATATTGCCGCATTCTTAAAATTTGCTACTACCTTTAATTCAGGCCGCCATGTATTTAACTATGTCGATAAACCTGATTTTAATATGGAAGACCTTACAGATATAATCTGCAAAGCAATGGATAAGCATAAGTCTAATATCCATGTACCATACAGTGTTGGTCTGTTGGGTGGTTACTGCTTTGACATTCTGGCAAAAGTGACTGGTAAGGAATTCCCGATAAGCAGCATCCGCATTAAAAAATTCTGTGCCCGTACTCAGTTTAAATCCGATTTTATTGCTGATACCGGATTTGTTGCCCCAGTGAGCCTGGAACAGGGAATTGCTAATACTGTTCGCCACGAATTTAAGAAGTAACATTATAACACCATGTTTTATTTGATAAACTATTGCCCCTTAAGAGAGGG