Orthogroup:group_2175


Homologs in group_2175

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16360 FBDBKF_16360 Morganella morganii S1 - UDP-glucose 4-epimerase
EHELCC_16395 EHELCC_16395 Morganella morganii S2 - UDP-glucose 4-epimerase
NLDBIP_16945 NLDBIP_16945 Morganella morganii S4 - UDP-glucose 4-epimerase
LHKJJB_16865 LHKJJB_16865 Morganella morganii S3 - UDP-glucose 4-epimerase
HKOGLL_16975 HKOGLL_16975 Morganella morganii S5 - UDP-glucose 4-epimerase
F4V73_RS16250 F4V73_RS16250 Morganella psychrotolerans - NAD(P)-dependent oxidoreductase
F4V73_RS17215 F4V73_RS17215 Morganella psychrotolerans - NAD-dependent epimerase/dehydratase family protein

Distribution of group_2175 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2175 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2175

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2175.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 UDP-glucose 4-epimerase 5
2 NAD(P)-dependent oxidoreductase 1
3 NAD-dependent epimerase/dehydratase family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0451 7 M Cell wall/membrane/envelope biogenesis (M) Nucleoside-diphosphate-sugar epimerase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K19997 6 GlcNAc-P-P-Und epimerase [EC:5.1.3.26] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01370 7 NAD dependent epimerase/dehydratase family

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG019018 5 NAD-dependent epimerase/dehydratase family protein VF0392 Immune modulation

Annotations of the 125 SwissProt hits

Annotation Number of occurrences
2-alkyl-3-oxoalkanoate reductase 3
3 beta-hydroxysteroid dehydrogenase type 7 2
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase 6
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 5
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 4
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 3 1
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 4 1
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 6 1
3-beta-hydroxysteroid dehydrogenase 2
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 1
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 1
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 1
ADP-L-glycero-D-manno-heptose-6-epimerase 1
Aurachin B dehydrogenase 1
Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 2
Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3 1
Bifunctional protein GAL10 1
Bifunctional protein gal10 1
Cinnamoyl-CoA reductase 1 1
GDP-6-deoxy-D-talose 4-dehydrogenase 1
Low-salt glycan biosynthesis protein Agl12 1
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase 1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial 3
NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial 1
NADPH-dependent 3-keto-steroid reductase Hsd3b4 1
NADPH-dependent 3-keto-steroid reductase Hsd3b5 2
Photosystem II assembly factor Ycf39 4
Probable UDP-arabinose 4-epimerase 1 1
Probable UDP-arabinose 4-epimerase 3 1
Putative UDP-arabinose 4-epimerase 4 1
Putative dihydroflavonol 4-reductase 1
Putative short-chain dehydrogenase/reductase family 42E member 2 1
Short-chain dehydrogenase/reductase family 42E member 1 6
Sterol demethylase protein B 1
Sterol-4-alpha-carboxylate 3-dehydrogenase ERG26, decarboxylating 2
Sterol-4-alpha-carboxylate 3-dehydrogenase erg26, decarboxylating 2
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating 5
Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 1
Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 1
Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 1
UDP-glucose 4-epimerase 29
UDP-glucose 4-epimerase 1 1
UDP-glucose 4-epimerase 2 2
UDP-glucose 4-epimerase 3 1
UDP-glucose 4-epimerase 4 2
UDP-glucose 4-epimerase 5 1
UDP-glucose 4-epimerase GEPI42 1
UDP-glucose 4-epimerase GEPI48 1
Uncharacterized UDP-glucose epimerase YtcB 1
Uncharacterized protein YbjS 1
Uncharacterized protein y4nG 1
Uncharacterized protein y4nL 1
Vi polysaccharide biosynthesis protein VipB/TviC 1
dTDP-D-glucose 4,6-dehydratase 4
dTDP-glucose 4,6-dehydratase 3
dTDP-glucose 4,6-dehydratase 1 1

Protein length

Min length 316
Max length 334
Mean length (sd) 318.6 (6.8)
Median length 316.0

Protein length distribution