Homologs in group_388

Help

7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14890 FBDBKF_14890 100.0 Morganella morganii S1 sSL2 Superfamily II DNA or RNA helicase
FBDBKF_16605 FBDBKF_16605 29.2 Morganella morganii S1 - Type I restriction enzyme endonuclease subunit
NLDBIP_16225 NLDBIP_16225 100.0 Morganella morganii S4 sSL2 Superfamily II DNA or RNA helicase
LHKJJB_15615 LHKJJB_15615 100.0 Morganella morganii S3 sSL2 Superfamily II DNA or RNA helicase
HKOGLL_14735 HKOGLL_14735 100.0 Morganella morganii S5 sSL2 Superfamily II DNA or RNA helicase
F4V73_RS07690 F4V73_RS07690 89.9 Morganella psychrotolerans - DEAD/DEAH box helicase
PMI_RS04060 PMI_RS04060 74.2 Proteus mirabilis HI4320 - DEAD/DEAH box helicase

Distribution of the homologs in the orthogroup group_388

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_388

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P33919 0.0 882 70 1 585 1 radD Putative DNA repair helicase RadD Escherichia coli (strain K12)
Q1MTR1 4.08e-33 137 28 12 372 3 irc3 Putative mitochondrial ATP-dependent helicase irc3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q06683 3.43e-25 114 25 12 377 1 IRC3 Putative ATP-dependent helicase IRC3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P24125 6.94e-24 108 27 19 402 4 None 51.5 kDa protein Lactococcus phage (isolate 7-9)
Q971U1 2.3e-15 82 26 11 380 1 xpb1 DNA 3'-5' helicase/translocase StoXPB1 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Q07736 2.11e-12 73 24 18 401 1 hsdR Type I restriction enzyme EcoAI endonuclease subunit Escherichia coli
P08956 2.81e-12 73 24 17 410 1 hsdR Type I restriction enzyme EcoKI endonuclease subunit Escherichia coli (strain K12)
Q47281 3.96e-08 60 23 19 401 3 hsdR Type I restriction enzyme EcoEI endonuclease subunit Escherichia coli
A7IB61 5.45e-08 59 28 7 148 3 hel308 ATP-dependent DNA helicase Hel308 Methanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8)
Q99J87 3.53e-07 57 29 8 181 1 Dhx58 ATP-dependent RNA helicase DHX58 Mus musculus
Q970I2 7.36e-07 55 31 4 152 1 xpb2 DNA 3'-5' translocase XPB2 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Q9BYX4 1.41e-05 52 29 9 192 1 IFIH1 Interferon-induced helicase C domain-containing protein 1 Homo sapiens
P20703 1.64e-05 51 23 17 367 1 uvsW ATP-dependent DNA helicase uvsW Enterobacteria phage T4
Q9TXJ8 3.63e-05 50 27 5 173 3 K02F3.12 Putative ATP-dependent DNA helicase Q1 Caenorhabditis elegans
A8WK63 4.5e-05 50 28 6 173 3 CBG24191 Putative ATP-dependent DNA helicase Q1 Caenorhabditis briggsae
A7EFH4 4.9e-05 50 29 7 143 3 mph1 ATP-dependent DNA helicase mph1 Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)
A1D4V5 8.37e-05 49 28 7 144 3 mph1 ATP-dependent DNA helicase mph1 Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181)
Q8R5F7 9.77e-05 49 29 10 192 1 Ifih1 Interferon-induced helicase C domain-containing protein 1 Mus musculus
Q4WKB5 0.000102 49 28 7 144 3 mph1 ATP-dependent DNA helicase mph1 Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)
B0XMV6 0.000102 49 28 7 144 3 mph1 ATP-dependent DNA helicase mph1 Aspergillus fumigatus (strain CBS 144.89 / FGSC A1163 / CEA10)
Q9VDA0 0.000141 48 28 7 175 1 Fancm DEAD-box ATP-dependent DNA helicase Fancm Drosophila melanogaster
Q8PRZ9 0.000158 48 27 4 154 3 uvrB UvrABC system protein B Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
A6RIS1 0.000234 48 28 7 143 3 mph1 ATP-dependent DNA helicase MPH1 Botryotinia fuckeliana (strain B05.10)
Q8TKS3 0.000342 47 28 5 152 3 uvrB UvrABC system protein B Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
O26901 0.0004 47 28 6 163 1 hel308 ATP-dependent DNA helicase Hel308 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q1DY43 0.000414 47 26 6 151 3 MPH1 ATP-dependent DNA helicase MPH1 Coccidioides immitis (strain RS)
Q9YFQ8 0.000533 46 23 19 417 3 hel308 ATP-dependent DNA helicase Hel308 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Q9HE09 0.001 45 27 8 166 3 fml2 Putative ATP-dependent DNA helicase fml2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_15695
Feature type CDS
Gene sSL2
Product Superfamily II DNA or RNA helicase
Location 108504 - 110264 (strand: 1)
Length 1761 (nucleotides) / 586 (amino acids)

Contig

Accession ZDB_226
Length 116685 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_388
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF00271 Helicase conserved C-terminal domain
PF04851 Type III restriction enzyme, res subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1061 Transcription (K)
Replication, recombination and repair (L)		 KL Superfamily II DNA or RNA helicase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19789 DNA repair protein RadD - -

Protein Sequence

MTFTLRPYQQEAVDATLLYFRKHTTPAVIVLPTGAGKSLVIAELARLAHGRVLVLAHVKELVEQNHSKYQAYGLDAGIYSAGLSQKESSQKVIFGSVQSVARNTADFDGKFSLLIIDECHRISLSEDSQYQQVIQHLQKNNPALRILGLTATPYRLGSGWIYQYHYHGMIRGDHECFFRDCIYELPLRYMVSHQYLVPPQRLDMPVLQYDFSQVPVSAAGMFDTQVLAREVKKQKRITPRIVRQIIEYAAPRQGCMIFAATVEHAAEIVSLLPPGEAALVSADTPSAERETIIRNFKARELHYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIAGRGLRLSPGKTECLILDYAGNPHDLYMPEVGNHKPNSKSQPVQVFCPLCGFANLFWGLCTDDGHIIEHYGRRCQGIIDADDESARHQCDFRFRFKLCPSCNGENDIAARRCCHCDEILSDPDDLLKAALRLKDALVLRCGGMALSAGQDNRGEWLTINYYDEDGTTVSERFRLTTPAQRFVFEKQFLAQHLRAPGVPFQWQDAESVIRQQVLLRYPDFVVSRKKENYWQIREKIFDYQGRFRKSDSLA

Flanking regions ( +/- flanking 50bp)

AAAGTGTGATATGCTGACGCCCTGATTTTGTCTGTTCCGCCGGAGTTTCTGTGACGTTTACCCTGCGCCCTTATCAGCAGGAGGCTGTTGATGCCACCCTGCTCTATTTCCGCAAACATACCACGCCTGCAGTGATTGTTCTGCCTACCGGGGCGGGAAAAAGCCTAGTGATCGCCGAACTGGCGCGGCTGGCACACGGCCGTGTGCTGGTGCTGGCGCATGTCAAAGAGCTGGTAGAGCAGAATCACAGTAAATATCAGGCTTACGGGTTAGATGCCGGTATCTATTCCGCCGGATTATCGCAAAAAGAGTCTTCACAAAAAGTCATTTTCGGCAGCGTGCAGTCTGTCGCCCGTAATACGGCGGACTTTGACGGCAAATTTTCCCTGCTGATTATTGATGAGTGCCATCGTATCAGCCTCAGCGAAGACAGTCAGTATCAGCAGGTGATACAGCATCTGCAGAAAAATAACCCGGCCCTGCGCATTCTCGGCCTGACAGCCACGCCGTACCGGCTGGGCAGCGGCTGGATCTATCAGTATCACTATCATGGCATGATCCGCGGCGATCATGAATGCTTCTTCCGTGATTGTATTTATGAACTGCCGCTGCGTTATATGGTCAGCCATCAGTATCTGGTGCCGCCGCAGCGGCTGGATATGCCGGTACTGCAATATGATTTCTCACAGGTACCGGTCAGCGCCGCCGGGATGTTTGACACGCAGGTGCTGGCGCGGGAAGTGAAAAAACAAAAGCGGATCACACCGCGTATTGTCCGCCAGATTATTGAGTATGCCGCCCCCCGTCAGGGTTGCATGATATTTGCCGCCACGGTGGAACATGCGGCTGAAATTGTATCACTGCTGCCGCCGGGCGAAGCGGCACTGGTCAGTGCAGATACCCCGTCAGCGGAGCGGGAAACGATTATCCGGAATTTCAAAGCGCGGGAGCTGCATTATCTGGTCAACGTTTCCGTGCTCACCACCGGGTTTGATGCCCCGCATGTGGATGTGATTGCCATTCTGCGCCCGACAGAGTCAGTCAGCCTCTACCAGCAAATCGCCGGACGCGGTCTGCGTCTGTCTCCCGGAAAAACGGAGTGTCTGATCCTCGATTACGCCGGAAACCCGCACGACCTTTATATGCCGGAAGTCGGCAATCACAAACCGAACAGCAAAAGCCAGCCGGTGCAGGTATTCTGCCCGTTGTGCGGCTTTGCTAATCTGTTCTGGGGATTATGTACCGACGACGGGCATATCATCGAGCACTATGGCCGCCGCTGTCAGGGAATTATTGATGCGGATGATGAATCCGCCCGTCATCAGTGCGATTTCCGTTTCCGCTTTAAACTCTGCCCGTCCTGTAACGGGGAAAATGATATTGCCGCACGGCGCTGCTGCCACTGTGATGAAATCCTCAGTGACCCGGACGACTTGCTGAAAGCCGCACTGCGCCTGAAAGATGCCCTGGTGCTGCGCTGCGGCGGTATGGCGCTTTCTGCCGGACAGGATAACCGCGGTGAATGGCTGACCATAAACTATTACGATGAAGACGGCACCACTGTCAGCGAACGTTTCCGCCTGACCACCCCGGCACAGCGTTTTGTCTTTGAAAAACAGTTTCTGGCACAGCATCTGCGCGCACCCGGTGTGCCCTTTCAGTGGCAGGATGCAGAATCCGTGATCCGTCAGCAGGTGCTGCTGCGTTACCCGGATTTTGTTGTCTCACGCAAAAAAGAGAACTACTGGCAAATCCGCGAAAAAATCTTTGATTATCAGGGGCGATTCCGCAAATCTGACAGTCTGGCATAACCCTGAGTGCTGCTTTTTTGGTTTTATACCGGGTTTCGTTTGCCGTTTGT