Homologs in group_4742

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4742

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4742

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P10486 0.0 1740 80 2 1040 1 hsdR Type I restriction enzyme EcoR124I/EcoR124II endonuclease subunit Escherichia coli
Q4A127 1.45e-162 506 36 29 960 3 hsdR Type I restriction enzyme SsaAORF53P endonuclease subunit Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q5HK76 3.84e-162 505 36 29 962 3 hsdR Type I restriction enzyme SepRPIP endonuclease subunit Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
P17224 5.44e-156 467 75 0 295 3 prrD Type I restriction enzyme EcoprrI endonuclease subunit Escherichia coli
Q7A801 1.27e-154 485 36 26 887 1 hsdR Type I restriction enzyme SauN315I endonuclease subunit Staphylococcus aureus (strain N315)
Q99X26 1.27e-154 485 36 26 887 3 hsdR Type I restriction enzyme SauMu50ORF195P endonuclease subunit Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HJH8 4.3e-154 484 36 26 889 3 hsdR Type I restriction enzyme SauCOLORF180P endonuclease subunit Staphylococcus aureus (strain COL)
Q6GKB1 6.77e-154 483 36 26 887 3 hsdR Type I restriction enzyme SauMRSORF196P endonuclease subunit Staphylococcus aureus (strain MRSA252)
Q8NYL9 1.68e-153 482 36 26 887 3 hsdR Type I restriction enzyme SauMW2ORF169P endonuclease subunit Staphylococcus aureus (strain MW2)
Q6GCT1 1.68e-153 482 36 26 887 3 hsdR Type I restriction enzyme SauMSSORF170P endonuclease subunit Staphylococcus aureus (strain MSSA476)
P75433 2.19e-52 186 47 3 206 5 MPN_345 Putative type I restriction enzyme MpnIIP endonuclease subunit C-terminal part Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
O05052 1.62e-33 143 26 23 592 3 hsdR Type I restriction enzyme HindI endonuclease subunit Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q60295 4.11e-24 113 25 26 629 3 MJECL40 Putative type I restriction enzyme MjaIXP endonuclease subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P75431 3.71e-23 106 31 11 297 5 MPN_347 Putative type I restriction enzyme MpnIIP endonuclease subunit N-terminal part Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q57588 2.11e-14 82 25 13 392 3 MJ0124 Putative type I restriction enzyme MjaVIIP endonuclease subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q57588 5.84e-08 60 28 14 299 3 MJ0124 Putative type I restriction enzyme MjaVIIP endonuclease subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58611 1.73e-06 56 24 13 295 3 MJ1214 Putative type I restriction enzyme MjaVIIIP endonuclease subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P44281 9.12e-05 43 44 0 36 4 HI_1650 Uncharacterized protein HI_1650 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P33919 0.00018 49 27 8 183 1 radD Putative DNA repair helicase RadD Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_16605
Feature type CDS
Gene -
Product Type I restriction enzyme endonuclease subunit
Location 2201 - 5323 (strand: -1)
Length 3123 (nucleotides) / 1040 (amino acids)
In genomic island -

Contig

Accession contig_25
Length 47933 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4742
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF04313 Type I restriction enzyme R protein N terminus (HSDR_N)
PF12008 Type I restriction and modification enzyme - subunit R C terminal
PF18766 SWI2/SNF2 ATPase
PF22679 UvrB domain 3

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0610 Defense mechanisms (V) V Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ...

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] - -

Protein Sequence

MTQQTKTIAESNNFIVLDKYTARQDGGDRYQSEEELERELIQDLRNQGYEYLPDLTSPSAMLANVRTQLQVLNNVVFTDNEWRRFTEEYLDNPGDTIIDKTRKIHTDYICDFTFDDGRLDNIYLADKKKPVRNKVQVIRQFEQTGTHANRYDVTILVNGLPLVQIELKKRGVAIREAFNQIHRYSKESFNTDNSLFKYLQVFVISNGTDTRYFANTTKRDKNSFDFTMNWARSDNTLIKDLSDFTATFFQKNTLLNILFHYSVFDISNNLLIMRPYQIAATERILWKINSAYKAKHWRSKEGGGYIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNGSDSTAGLKRNLEKHDNKIIVTTIQKLNNLMKSEADLPVYRQQVVFIFDECHRSQFGEAQKNLKKKFNCFYQFGFTGTPIFAGKNALGAEDTAGVFGTELHSYIITDAIRDEKVLKFKVDYNDVRPMFKALETETDEQKLSAAENKHALLHPQRIAEVTHYILKNFRQKTHRTYPGAKGFNAMFAVSSVDAAKAYYETFKAIQQQAAAQNTSYKPLTVATIFSFAANEAQDAIGDINDESFDVTAMNSSAREFLESAIGDYNARFKLNYSTDGNNFQNYYRDLAKRVKNQEVDLLIVVGMFLTGFDAPALNTLFVDKNLRYHGLMQAFSRTNRIYDATKTFGNIVTFRDLEQATIDAITLFGKSNTRNVVMEKSYAEYMNGFTDSLTGETKRGFTEIVAELESRFPDPAGIESEKEKKAFVRLFGEYLRAENILQNYDEFVALKALQTLNLSDPAATEIFKAEHYLDDETFAELQMIRLPAERKVQDYRSAYNDIRDWQRRERSAEEKESTTVDWDDLVFEVDLLKSQEINLDYILGLIYDYHKKNTDKTTMKEEVKRLIRASLGNRAKEGLVVGFIELTDFSDLPDKESIIEAFYAFAQQAQAREAEALIREENLNDDAARRYLRASLKREYATENGTALNETLPKLSPLNPQYKTKKQTVFQKMVAFIEKFKGVGGKI

Flanking regions ( +/- flanking 50bp)

GCCGGTTTTACCGGCATTCAGCACAACTGAATGAAAAAGCAGGGAGCCGTATGACGCAGCAGACCAAAACCATCGCCGAATCAAATAACTTCATTGTGCTGGATAAATACACCGCCAGACAGGATGGCGGAGACCGTTATCAGAGTGAGGAAGAATTAGAGCGCGAACTGATTCAGGACCTGCGTAATCAGGGGTATGAGTATCTGCCGGACTTAACCTCACCGTCTGCCATGCTGGCCAATGTCAGAACTCAGCTTCAGGTACTGAATAACGTGGTTTTTACTGATAACGAGTGGCGGCGGTTTACGGAGGAGTATCTTGATAACCCCGGCGATACCATCATTGATAAAACCCGCAAAATTCACACCGATTATATTTGTGATTTTACCTTTGATGACGGGCGTCTGGACAATATTTACCTTGCTGACAAGAAAAAACCGGTCCGTAACAAAGTGCAGGTTATCCGCCAGTTTGAGCAGACCGGAACCCATGCCAACCGCTATGACGTGACAATACTGGTCAACGGCCTGCCGCTGGTGCAGATTGAGCTGAAAAAACGCGGTGTGGCTATCCGGGAAGCGTTTAACCAGATACACCGTTACAGCAAAGAAAGCTTTAATACTGATAATTCATTATTTAAATACCTTCAGGTCTTTGTGATTTCCAACGGCACAGATACCCGCTATTTTGCCAATACCACCAAACGCGATAAAAACAGTTTTGATTTCACCATGAACTGGGCCCGGTCAGACAATACCCTGATTAAAGACCTCAGTGATTTCACCGCCACGTTCTTTCAGAAAAATACCCTGCTGAATATCCTGTTTCATTACAGTGTGTTTGATATCAGCAATAACCTGCTGATTATGCGCCCTTACCAGATAGCCGCCACTGAACGGATTTTATGGAAAATCAACAGCGCATACAAAGCAAAGCACTGGCGCAGCAAAGAAGGCGGCGGGTATATCTGGCACACCACCGGCTCCGGCAAAACCCTGACCAGTTTTAAAGCGGCCCGGCTGGCCACTGAACTGGATTTTATCGATAAAGTGTTCTTCGTGGTTGACCGTAAAGACCTTGATTACCAGACCATGAAGGAATATCAGCGTTTTTCCCCTGACAGTGTCAACGGCTCTGACAGCACGGCCGGGCTGAAGCGCAATCTGGAAAAGCACGATAACAAAATTATTGTCACCACCATCCAGAAACTGAACAACCTGATGAAAAGTGAAGCGGATTTACCGGTTTACCGTCAGCAGGTGGTCTTTATTTTTGATGAGTGCCACCGCAGCCAGTTTGGCGAAGCACAGAAGAACCTGAAAAAGAAATTTAACTGTTTTTATCAGTTCGGGTTTACCGGTACCCCTATTTTTGCCGGTAAAAACGCATTGGGTGCGGAGGATACCGCCGGTGTCTTCGGCACAGAGCTGCATTCTTACATCATCACCGATGCTATCCGTGATGAGAAGGTGCTGAAATTTAAAGTGGATTACAACGATGTCCGTCCGATGTTTAAGGCACTGGAAACGGAAACGGACGAACAGAAACTCAGTGCCGCTGAAAATAAACACGCCCTGCTGCACCCGCAGCGGATTGCCGAAGTCACGCACTACATTCTGAAAAACTTCCGGCAGAAAACACACCGGACTTATCCGGGAGCAAAAGGGTTTAATGCGATGTTTGCCGTCAGCAGTGTGGATGCGGCAAAAGCCTATTATGAAACCTTTAAAGCCATTCAGCAGCAGGCTGCGGCGCAGAACACCAGCTATAAGCCGCTGACCGTTGCCACGATTTTTTCCTTTGCCGCCAATGAAGCGCAGGATGCAATCGGTGATATTAACGATGAGAGCTTTGATGTCACGGCCATGAACAGCAGTGCCAGAGAGTTTCTGGAATCCGCCATCGGGGATTACAACGCCCGGTTTAAACTGAACTACAGTACGGACGGAAATAATTTTCAGAACTACTACCGTGACCTTGCCAAACGGGTCAAAAATCAGGAGGTTGACCTGCTGATTGTTGTCGGGATGTTCCTGACCGGCTTTGATGCCCCGGCACTGAATACCCTGTTTGTGGACAAGAACCTGCGCTACCACGGACTGATGCAGGCCTTTTCCCGCACCAACCGGATTTATGATGCCACCAAAACCTTCGGTAATATTGTCACCTTCCGTGATTTGGAGCAGGCGACGATTGATGCCATCACTTTGTTCGGGAAAAGCAATACACGTAACGTTGTGATGGAAAAAAGCTATGCCGAGTATATGAACGGGTTTACGGACTCACTGACCGGTGAGACAAAACGGGGCTTTACCGAAATCGTGGCTGAACTGGAAAGCCGTTTCCCGGACCCGGCCGGTATTGAGTCAGAAAAAGAAAAGAAAGCCTTCGTCAGGCTGTTCGGGGAATATCTGCGGGCAGAAAATATCCTGCAGAACTACGATGAATTTGTTGCGCTGAAAGCCCTGCAGACACTGAATCTCAGTGACCCGGCCGCCACGGAAATCTTTAAAGCGGAACACTATCTGGATGATGAGACATTTGCGGAACTGCAGATGATACGGTTACCGGCTGAGCGTAAGGTTCAGGATTACCGTTCGGCATACAACGATATCCGTGACTGGCAGCGGCGTGAGCGGTCTGCTGAGGAAAAAGAGAGCACCACGGTTGACTGGGATGATTTGGTGTTTGAGGTGGATTTACTCAAATCGCAGGAAATAAACCTCGACTATATTCTGGGGCTGATTTACGACTATCACAAAAAAAATACCGATAAAACCACCATGAAAGAGGAAGTGAAACGGTTAATCCGTGCCAGTCTGGGGAACCGGGCCAAAGAGGGACTGGTGGTCGGTTTTATTGAACTCACTGATTTCAGTGACCTGCCGGATAAAGAAAGTATCATTGAGGCCTTCTACGCCTTTGCTCAGCAGGCACAGGCGCGTGAGGCTGAAGCCTTAATCAGGGAGGAAAATCTCAATGACGACGCGGCCAGGCGCTATCTGCGGGCATCCCTGAAGCGGGAGTATGCAACCGAAAACGGCACGGCGCTCAATGAAACCCTGCCGAAACTGAGTCCGTTAAATCCGCAGTACAAAACAAAGAAACAAACGGTATTTCAGAAGATGGTGGCTTTTATTGAGAAATTTAAAGGTGTCGGCGGGAAGATATAGTCAGTTACCAGAACAGCTGAAACGGGGGCGGGGGTCCTGTTATATATCAG