K19789


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K19789, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K19789
KO K19789
Description DNA repair protein RadD

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K19789 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_388 PMI_RS04060 908621 910384 -1 DEAD/DEAH box helicase Proteus mirabilis HI4320
1 group_3387 FBDBKF_13190 27210 28787 -1 Helicase Morganella morganii S1
2 group_3387 EHELCC_08905 246404 247981 1 Helicase Morganella morganii S2
3 group_3387 NLDBIP_09230 246404 247981 1 Helicase Morganella morganii S4
4 group_3387 LHKJJB_05035 9178 10755 -1 Helicase Morganella morganii S3
5 group_3387 HKOGLL_05880 230995 232572 1 Helicase Morganella morganii S5
6 group_388 FBDBKF_14890 78428 80188 1 sSL2 Superfamily II DNA or RNA helicase Morganella morganii S1
7 group_388 EHELCC_15695 108504 110264 1 sSL2 Superfamily II DNA or RNA helicase Morganella morganii S2
8 group_388 NLDBIP_16225 108504 110264 1 sSL2 Superfamily II DNA or RNA helicase Morganella morganii S4
9 group_388 LHKJJB_15615 6422 8182 -1 sSL2 Superfamily II DNA or RNA helicase Morganella morganii S3
10 group_388 HKOGLL_14735 5634 7394 -1 sSL2 Superfamily II DNA or RNA helicase Morganella morganii S5
11 group_388 F4V73_RS07690 1607984 1609744 1 DEAD/DEAH box helicase Morganella psychrotolerans