COG1061


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG1061
Protein list: lists the 18 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description Superfamily II DNA or RNA helicase
Function(s) descr. Transcription (K)
Replication, recombination and repair (L)

Occurence in the database

COG1061 is associated with 18 different proteins
The 18 proteins are classified into 4 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3385 FBDBKF_13190 27210 28787 -1 Helicase Morganella morganii S1
1 group_2022 FBDBKF_14890 78428 80188 1 sSL2 Superfamily II DNA or RNA helicase Morganella morganii S1
2 group_3636 FBDBKF_20620 7 2136 1 hypothetical protein Morganella morganii S1
3 group_3636 EHELCC_04305 188153 191134 1 DEAD/DEAH box helicase family protein Morganella morganii S2
4 group_3385 EHELCC_08905 246404 247981 1 Helicase Morganella morganii S2
5 group_2022 EHELCC_15695 108504 110264 1 sSL2 Superfamily II DNA or RNA helicase Morganella morganii S2
6 group_3636 NLDBIP_04305 187949 190930 1 DEAD/DEAH box helicase family protein Morganella morganii S4
7 group_3385 NLDBIP_09230 246404 247981 1 Helicase Morganella morganii S4
8 group_2022 NLDBIP_16225 108504 110264 1 sSL2 Superfamily II DNA or RNA helicase Morganella morganii S4
9 group_3385 LHKJJB_05035 9178 10755 -1 Helicase Morganella morganii S3
10 group_3636 LHKJJB_10135 188063 191044 1 DEAD/DEAH box helicase family protein Morganella morganii S3
11 group_2022 LHKJJB_15615 6422 8182 -1 sSL2 Superfamily II DNA or RNA helicase Morganella morganii S3
12 group_3385 HKOGLL_05880 230995 232572 1 Helicase Morganella morganii S5
13 group_3636 HKOGLL_08840 8 2989 -1 DEAD/DEAH box helicase family protein Morganella morganii S5
14 group_2022 HKOGLL_14735 5634 7394 -1 sSL2 Superfamily II DNA or RNA helicase Morganella morganii S5
15 group_2022 F4V73_RS07690 1607984 1609744 1 DEAD/DEAH box helicase Morganella psychrotolerans
16 group_293 F4V73_RS18290 96901 98547 1 DEAD/DEAH box helicase Morganella psychrotolerans
17 group_2022 PMI_RS04060 908621 910384 -1 DEAD/DEAH box helicase Proteus mirabilis HI4320