Homologs in group_410

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17715 FBDBKF_17715 100.0 Morganella morganii S1 tonB Periplasmic protein TonB, links inner and outer membranes
NLDBIP_10120 NLDBIP_10120 100.0 Morganella morganii S4 tonB Periplasmic protein TonB, links inner and outer membranes
LHKJJB_07635 LHKJJB_07635 100.0 Morganella morganii S3 tonB Periplasmic protein TonB, links inner and outer membranes
HKOGLL_07185 HKOGLL_07185 100.0 Morganella morganii S5 tonB Periplasmic protein TonB, links inner and outer membranes
F4V73_RS15245 F4V73_RS15245 82.5 Morganella psychrotolerans - TonB family protein
PMI_RS07545 PMI_RS07545 31.1 Proteus mirabilis HI4320 - TonB family protein
PMI_RS18455 PMI_RS18455 44.3 Proteus mirabilis HI4320 - energy transducer TonB

Distribution of the homologs in the orthogroup group_410

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_410

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q05613 1.94e-13 71 34 1 128 3 tonB Protein TonB Pseudomonas putida
Q9ZH79 0.000417 44 33 1 74 3 tonB Protein TonB Pasteurella multocida (strain Pm70)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_09740
Feature type CDS
Gene tonB
Product Periplasmic protein TonB, links inner and outer membranes
Location 179651 - 180427 (strand: -1)
Length 777 (nucleotides) / 258 (amino acids)

Contig

Accession ZDB_218
Length 215957 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_410
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF03544 Gram-negative bacterial TonB protein C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0810 Cell wall/membrane/envelope biogenesis (M) M Periplasmic protein TonB, links inner and outer membranes

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03832 periplasmic protein TonB - -

Protein Sequence

MLNVAAACYQNRRYSVGGTAASVGAHALLLALFLGWLGFSADEPKGMLPPAFVLMPGVYQLESAPPEKAEGVRQVMSQPAPQPVAEPERESAVDKLAVSDQGTWTRKAEKPKKKADKKPVTEIKMPETDNPSPVPAESTSAPRQGDSSASRADFTSHAPQPVSGSTGWESSVHSHLAKYKRYPRALLRYKSTGVSHVKVTLNMQGNVVSAELVNSSGTKLLDKEALATVQRASPFPLPPQERGRNGHIEIVTPIGFYL

Flanking regions ( +/- flanking 50bp)

ATTTTACAAATTGAAATACGTGAATAACGATTAAAAAAGTGAGTTGAGTGATGTTGAATGTGGCTGCGGCCTGTTATCAGAACAGGCGATACTCAGTCGGCGGCACAGCTGCCAGTGTGGGTGCTCATGCGCTGCTGCTGGCACTGTTTCTGGGCTGGCTGGGTTTTTCAGCGGATGAGCCGAAAGGCATGCTGCCCCCGGCGTTTGTGCTGATGCCGGGAGTTTATCAGCTGGAAAGTGCCCCGCCGGAAAAGGCGGAAGGTGTCAGACAGGTGATGTCACAACCGGCACCACAGCCGGTGGCTGAGCCGGAGCGGGAGTCTGCTGTTGATAAACTGGCGGTTTCTGATCAGGGCACCTGGACGCGGAAAGCGGAGAAACCAAAGAAAAAAGCGGACAAGAAACCGGTAACGGAGATCAAAATGCCGGAAACGGATAACCCGTCCCCGGTACCGGCAGAGAGCACTTCCGCGCCGCGTCAGGGCGACAGTTCCGCGAGCCGTGCGGATTTTACCAGCCATGCACCGCAGCCGGTCAGCGGCAGTACCGGCTGGGAAAGCTCGGTACATTCGCATCTGGCGAAATACAAACGCTATCCGCGCGCACTGCTGCGCTATAAATCCACCGGCGTTTCTCATGTGAAAGTGACTCTGAACATGCAGGGAAATGTTGTCTCTGCGGAGCTGGTTAATTCATCCGGCACAAAACTGCTCGATAAAGAAGCGCTTGCCACCGTACAACGGGCATCACCTTTCCCGCTGCCGCCACAGGAACGCGGCAGAAACGGTCATATTGAGATAGTCACTCCCATCGGTTTTTACCTGTAACCAGCAGACAATTCCCGAAGTTACGTTTTTATTACCAGGAATTGTCTGTA