PF17274


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF17274, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF17274
Description Family of unknown function (DUF5339)

Occurence in the database

PF17274 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_39 FBDBKF_00755 137926 138249 1 Lipoprotein Morganella morganii S1
1 group_39 FBDBKF_01755 41524 41817 -1 DUF5339 domain-containing protein Morganella morganii S1
2 group_39 EHELCC_00790 170619 170942 -1 Lipoprotein Morganella morganii S2
3 group_39 EHELCC_02225 429344 429637 -1 DUF5339 domain-containing protein Morganella morganii S2
4 group_39 NLDBIP_01235 250499 250792 1 DUF5339 domain-containing protein Morganella morganii S4
5 group_39 NLDBIP_02670 509194 509517 1 Lipoprotein Morganella morganii S4
6 group_39 LHKJJB_00800 141893 142186 -1 DUF5339 domain-containing protein Morganella morganii S3
7 group_39 LHKJJB_04185 116435 116758 1 Lipoprotein Morganella morganii S3
8 group_39 HKOGLL_00840 147404 147697 -1 DUF5339 domain-containing protein Morganella morganii S5
9 group_39 HKOGLL_02860 170824 171147 -1 Lipoprotein Morganella morganii S5
10 group_39 F4V73_RS04085 865483 865776 -1 DUF5339 domain-containing protein Morganella psychrotolerans
11 group_39 F4V73_RS06755 1402882 1403193 1 DUF5339 domain-containing protein Morganella psychrotolerans
12 group_39 PMI_RS04815 1058997 1059278 1 DUF5339 domain-containing protein Proteus mirabilis HI4320
13 group_39 PMI_RS14080 3126939 3127241 1 DUF5339 family protein Proteus mirabilis HI4320