PF13847


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13847, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13847
Description Methyltransferase domain

Occurence in the database

PF13847 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_612 FBDBKF_01930 73539 74375 1 prmC peptide chain release factor N(5)-glutamine methyltransferase Morganella morganii S1
1 group_3504 FBDBKF_17345 44630 46267 1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S1
2 group_3504 EHELCC_01545 309234 310871 -1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S2
3 group_612 EHELCC_02400 461359 462195 1 prmC peptide chain release factor N(5)-glutamine methyltransferase Morganella morganii S2
4 group_612 NLDBIP_01060 217941 218777 -1 prmC peptide chain release factor N(5)-glutamine methyltransferase Morganella morganii S4
5 group_3504 NLDBIP_01915 369265 370902 1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S4
6 group_3504 LHKJJB_00120 21783 23420 -1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S3
7 group_612 LHKJJB_00975 173908 174744 1 prmC peptide chain release factor N(5)-glutamine methyltransferase Morganella morganii S3
8 group_3504 HKOGLL_00160 27294 28931 -1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S5
9 group_612 HKOGLL_01015 179419 180255 1 prmC peptide chain release factor N(5)-glutamine methyltransferase Morganella morganii S5
10 group_1451 F4V73_RS10745 280351 281190 -1 class I SAM-dependent methyltransferase Morganella psychrotolerans
11 group_612 PMI_RS05270 1151628 1152476 1 prmC peptide chain release factor N(5)-glutamine methyltransferase Proteus mirabilis HI4320
12 group_574 PMI_RS07855 1719790 1720602 -1 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase Proteus mirabilis HI4320