PF13192


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13192, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13192
Description Thioredoxin domain

Occurence in the database

PF13192 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1469 FBDBKF_09425 114517 116091 1 ahpF alkyl hydroperoxide reductase subunit F Morganella morganii S1
1 group_1469 EHELCC_09985 30013 31587 -1 ahpF alkyl hydroperoxide reductase subunit F Morganella morganii S2
2 group_1469 NLDBIP_10330 8284 9858 -1 ahpF alkyl hydroperoxide reductase subunit F Morganella morganii S4
3 group_1469 LHKJJB_11025 181670 183244 1 ahpF alkyl hydroperoxide reductase subunit F Morganella morganii S3
4 group_1469 HKOGLL_14085 114971 116545 1 ahpF alkyl hydroperoxide reductase subunit F Morganella morganii S5
5 group_1469 F4V73_RS10540 238742 240316 -1 ahpF alkyl hydroperoxide reductase subunit F Morganella psychrotolerans
6 group_1469 PMI_RS05855 1282192 1283757 1 ahpF alkyl hydroperoxide reductase subunit F Proteus mirabilis HI4320