Orthogroup:group_1520


Homologs in group_1520

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09825 FBDBKF_09825 Morganella morganii S1 sdhB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
EHELCC_04625 EHELCC_04625 Morganella morganii S2 sdhB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
NLDBIP_04625 NLDBIP_04625 Morganella morganii S4 sdhB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
LHKJJB_14005 LHKJJB_14005 Morganella morganii S3 sdhB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
HKOGLL_12530 HKOGLL_12530 Morganella morganii S5 sdhB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit
F4V73_RS00520 F4V73_RS00520 Morganella psychrotolerans - succinate dehydrogenase iron-sulfur subunit
PMI_RS02795 PMI_RS02795 Proteus mirabilis HI4320 - succinate dehydrogenase iron-sulfur subunit

Distribution of group_1520 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1520 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1520

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1520.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sdhB 5
2 - 2

Product

# Product Occurence
1 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 5
2 succinate dehydrogenase iron-sulfur subunit 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0479 7 C Energy production and conversion (C) Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13085 7 2Fe-2S iron-sulfur cluster binding domain
PF13534 7 4Fe-4S dicluster domain

Annotations of the 55 SwissProt hits

Annotation Number of occurrences
8-methylmenaquinol:fumarate reductase iron-sulfur subunit 1
Fumarate reductase (CoM/CoB) subunit B 1
Fumarate reductase iron-sulfur subunit 11
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 4
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial 2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial 2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial 1
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial 21
Succinate dehydrogenase iron-sulfur subunit 10
Uncharacterized iron-sulfur protein MJ0092 1
Uncharacterized iron-sulfur protein MMP1067 1

Protein length

Unique protein length 238

Protein length distribution