PF09285


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF09285, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF09285
Description Elongation factor P, C-terminal

Occurence in the database

PF09285 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_800 FBDBKF_03760 156343 156909 -1 efp elongation factor P Morganella morganii S1
1 group_1980 FBDBKF_14850 71828 72400 1 yeiP elongation factor P-like protein YeiP Morganella morganii S1
2 group_800 EHELCC_06775 90194 90760 1 efp elongation factor P Morganella morganii S2
3 group_1980 EHELCC_15655 101904 102476 1 yeiP elongation factor P-like protein YeiP Morganella morganii S2
4 group_800 NLDBIP_07100 90067 90633 1 efp elongation factor P Morganella morganii S4
5 group_1980 NLDBIP_16185 101904 102476 1 yeiP elongation factor P-like protein YeiP Morganella morganii S4
6 group_800 LHKJJB_06635 53813 54379 1 efp elongation factor P Morganella morganii S3
7 group_1980 LHKJJB_15655 14210 14782 -1 yeiP elongation factor P-like protein YeiP Morganella morganii S3
8 group_800 HKOGLL_04295 179008 179574 -1 efp elongation factor P Morganella morganii S5
9 group_1980 HKOGLL_14775 13422 13994 -1 yeiP elongation factor P-like protein YeiP Morganella morganii S5
10 group_1980 F4V73_RS07650 1601378 1601950 1 yeiP elongation factor P-like protein YeiP Morganella psychrotolerans
11 group_800 F4V73_RS11115 361160 361726 1 efp elongation factor P Morganella psychrotolerans
12 group_1980 PMI_RS04100 916621 917193 -1 yeiP elongation factor P-like protein YeiP Proteus mirabilis HI4320
13 group_800 PMI_RS12510 2774425 2774991 -1 efp elongation factor P Proteus mirabilis HI4320