Orthogroup:group_2016


Homologs in group_2016

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15140 FBDBKF_15140 Morganella morganii S1 nqrC Na(+)-translocating NADH-quinone reductase subunit C
EHELCC_11105 EHELCC_11105 Morganella morganii S2 nqrC Na(+)-translocating NADH-quinone reductase subunit C
NLDBIP_11450 NLDBIP_11450 Morganella morganii S4 nqrC Na(+)-translocating NADH-quinone reductase subunit C
LHKJJB_11310 LHKJJB_11310 Morganella morganii S3 nqrC Na(+)-translocating NADH-quinone reductase subunit C
HKOGLL_09920 HKOGLL_09920 Morganella morganii S5 nqrC Na(+)-translocating NADH-quinone reductase subunit C
F4V73_RS12305 F4V73_RS12305 Morganella psychrotolerans - Na(+)-translocating NADH-quinone reductase subunit C
PMI_RS01695 PMI_RS01695 Proteus mirabilis HI4320 - Na(+)-translocating NADH-quinone reductase subunit C

Distribution of group_2016 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2016 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2016

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2016.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nqrC 5
2 - 2

Product

# Product Occurence
1 Na(+)-translocating NADH-quinone reductase subunit C 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2869 7 C Energy production and conversion (C) Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00348 7 Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04205 7 FMN-binding domain

Annotations of the 19 SwissProt hits

Annotation Number of occurrences
Na(+)-translocating NADH-quinone reductase subunit C 19

Protein length

Min length 261
Max length 264
Mean length (sd) 263.6 (1.1)
Median length 264.0

Protein length distribution