PF08402


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08402, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08402
Description TOBE domain

Occurence in the database

PF08402 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_299 FBDBKF_07915 112516 113565 -1 fbpC ferric ABC transporter ATP-binding protein Morganella morganii S1
1 group_1467 FBDBKF_09415 112351 113466 -1 potA spermidine/putrescine ABC transporter ATP-binding protein PotA Morganella morganii S1
2 group_2298 FBDBKF_17650 26599 27627 -1 potA ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component Morganella morganii S1
3 group_1467 EHELCC_09995 32638 33753 1 potA spermidine/putrescine ABC transporter ATP-binding protein PotA Morganella morganii S2
4 group_299 EHELCC_13745 86710 87759 -1 fbpC ferric ABC transporter ATP-binding protein Morganella morganii S2
5 group_2298 EHELCC_18135 25975 27003 -1 potA ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component Morganella morganii S2
6 group_1467 NLDBIP_10340 10909 12024 1 potA spermidine/putrescine ABC transporter ATP-binding protein PotA Morganella morganii S4
7 group_299 NLDBIP_14190 107585 108634 -1 fbpC ferric ABC transporter ATP-binding protein Morganella morganii S4
8 group_2298 NLDBIP_18015 11734 12762 1 potA ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component Morganella morganii S4
9 group_299 LHKJJB_08660 51115 52164 1 fbpC ferric ABC transporter ATP-binding protein Morganella morganii S3
10 group_1467 LHKJJB_11015 179504 180619 -1 potA spermidine/putrescine ABC transporter ATP-binding protein PotA Morganella morganii S3
11 group_2298 LHKJJB_18210 11734 12762 1 potA ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component Morganella morganii S3
12 group_299 HKOGLL_08210 51115 52164 1 fbpC ferric ABC transporter ATP-binding protein Morganella morganii S5
13 group_1467 HKOGLL_14075 112805 113920 -1 potA spermidine/putrescine ABC transporter ATP-binding protein PotA Morganella morganii S5
14 group_2298 HKOGLL_17990 25975 27003 -1 potA ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component Morganella morganii S5
15 group_1467 F4V73_RS10550 241629 242744 1 potA spermidine/putrescine ABC transporter ATP-binding protein PotA Morganella psychrotolerans
16 group_299 F4V73_RS13070 229938 230987 1 fbpC ferric ABC transporter ATP-binding protein Morganella psychrotolerans
17 group_2298 F4V73_RS15030 245253 246281 -1 ABC transporter ATP-binding protein Morganella psychrotolerans
18 group_299 PMI_RS00905 223039 224079 -1 fbpC ferric ABC transporter ATP-binding protein Proteus mirabilis HI4320
19 group_1467 PMI_RS13490 2987846 2988961 -1 potA spermidine/putrescine ABC transporter ATP-binding protein PotA Proteus mirabilis HI4320
20 group_230 PMI_RS17985 3951675 3952769 -1 ugpC sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC Proteus mirabilis HI4320