PF07724


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07724, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 38 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07724
Description AAA domain (Cdc48 subfamily)

Occurence in the database

PF07724 is associated with 38 different proteins (see tab "Protein list" and "Profile")
The 38 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_147 FBDBKF_01335 258317 261037 1 tssH type VI secretion system ATPase TssH Morganella morganii S1
1 group_1214 FBDBKF_07065 76459 78744 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S1
2 group_1759 FBDBKF_12250 110300 111634 1 hslU HslU--HslV peptidase ATPase subunit Morganella morganii S1
3 group_2052 FBDBKF_15370 81826 84399 1 clpB ATP-dependent chaperone ClpB Morganella morganii S1
4 group_2112 FBDBKF_15875 25389 26669 1 clpX ATP-dependent protease ATP-binding subunit ClpX Morganella morganii S1
5 group_147 EHELCC_00210 47831 50551 -1 tssH type VI secretion system ATPase TssH Morganella morganii S2
6 group_1214 EHELCC_03905 107442 109727 -1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S2
7 group_2052 EHELCC_10875 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S2
8 group_1759 EHELCC_14055 23071 24405 -1 hslU HslU--HslV peptidase ATPase subunit Morganella morganii S2
9 group_2112 EHELCC_18475 12828 14108 1 clpX ATP-dependent protease ATP-binding subunit ClpX Morganella morganii S2
10 group_147 NLDBIP_03250 629585 632305 1 tssH type VI secretion system ATPase TssH Morganella morganii S4
11 group_1214 NLDBIP_03905 107238 109523 -1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S4
12 group_2052 NLDBIP_11220 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S4
13 group_1759 NLDBIP_15150 27008 28342 -1 hslU HslU--HslV peptidase ATPase subunit Morganella morganii S4
14 group_2112 NLDBIP_17310 12828 14108 1 clpX ATP-dependent protease ATP-binding subunit ClpX Morganella morganii S4
15 group_147 LHKJJB_04765 236826 239546 1 tssH type VI secretion system ATPase TssH Morganella morganii S3
16 group_1214 LHKJJB_09735 107352 109637 -1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S3
17 group_2052 LHKJJB_11080 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S3
18 group_1759 LHKJJB_15460 110300 111634 1 hslU HslU--HslV peptidase ATPase subunit Morganella morganii S3
19 group_2112 LHKJJB_17350 42080 43360 -1 clpX ATP-dependent protease ATP-binding subunit ClpX Morganella morganii S3
20 group_147 HKOGLL_02280 48036 50756 -1 tssH type VI secretion system ATPase TssH Morganella morganii S5
21 group_1214 HKOGLL_09240 81415 83700 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S5
22 group_2052 HKOGLL_09690 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S5
23 group_1759 HKOGLL_14580 96963 98297 1 hslU HslU--HslV peptidase ATPase subunit Morganella morganii S5
24 group_2112 HKOGLL_17045 12828 14108 1 clpX ATP-dependent protease ATP-binding subunit ClpX Morganella morganii S5
25 group_1214 F4V73_RS01250 264241 266526 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella psychrotolerans
26 group_147 F4V73_RS02335 495047 497734 -1 tssH type VI secretion system ATPase TssH Morganella psychrotolerans
27 group_147 F4V73_RS06995 1451477 1453738 -1 AAA family ATPase Morganella psychrotolerans
28 group_147 F4V73_RS09390 1976445 1979222 -1 tssH type VI secretion system ATPase TssH Morganella psychrotolerans
29 group_2052 F4V73_RS12085 553 3126 -1 clpB ATP-dependent chaperone ClpB Morganella psychrotolerans
30 group_2112 F4V73_RS16435 104962 106242 -1 clpX ATP-dependent protease ATP-binding subunit ClpX Morganella psychrotolerans
31 group_147 F4V73_RS16840 194692 197388 -1 tssH type VI secretion system ATPase TssH Morganella psychrotolerans
32 group_1759 F4V73_RS17080 44006 45340 1 hslU HslU--HslV peptidase ATPase subunit Morganella psychrotolerans
33 group_2112 PMI_RS00560 143771 145042 1 clpX ATP-dependent protease ATP-binding subunit ClpX Proteus mirabilis HI4320
34 group_2052 PMI_RS01920 449810 452386 1 clpB ATP-dependent chaperone ClpB Proteus mirabilis HI4320
35 group_1214 PMI_RS03395 749183 751477 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Proteus mirabilis HI4320
36 group_147 PMI_RS03640 817939 820650 -1 tssH type VI secretion system ATPase TssH Proteus mirabilis HI4320
37 group_1759 PMI_RS15900 3529049 3530389 -1 hslU HslU--HslV peptidase ATPase subunit Proteus mirabilis HI4320