Orthogroup:group_1273


Homologs in group_1273

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07565 FBDBKF_07565 Morganella morganii S1 eutN ethanolamine utilization microcompartment protein EutN
EHELCC_17235 EHELCC_17235 Morganella morganii S2 eutN ethanolamine utilization microcompartment protein EutN
NLDBIP_13840 NLDBIP_13840 Morganella morganii S4 eutN ethanolamine utilization microcompartment protein EutN
LHKJJB_09010 LHKJJB_09010 Morganella morganii S3 eutN ethanolamine utilization microcompartment protein EutN
HKOGLL_08560 HKOGLL_08560 Morganella morganii S5 eutN ethanolamine utilization microcompartment protein EutN
F4V73_RS13555 F4V73_RS13555 Morganella psychrotolerans eutN ethanolamine utilization microcompartment protein EutN
PMI_RS13395 PMI_RS13395 Proteus mirabilis HI4320 - EutN/CcmL family microcompartment protein

Distribution of group_1273 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1273 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1273

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1273.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 eutN 6
2 - 1

Product

# Product Occurence
1 ethanolamine utilization microcompartment protein EutN 6
2 EutN/CcmL family microcompartment protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4576 7 QC Secondary metabolites biosynthesis, transport and catabolism (Q)
Energy production and conversion (C)		 Carboxysome shell and ethanolamine utilization microcompartment protein CcmK/EutM

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04028 7 ethanolamine utilization protein EutN - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03319 7 Ethanolamine utilisation protein EutN/carboxysome

Annotations of the 18 SwissProt hits

Annotation Number of occurrences
Bacterial microcompartment shell vertex protein 1
Bacterial microcompartment shell vertex protein EutN 3
Bacterial microcompartment shell vertex protein GrpN 1
Bacterial microcompartment shell vertex protein PduN 2
Carboxysome shell vertex protein CcmL 5
Carboxysome shell vertex protein CsoS4A 3
Carboxysome shell vertex protein CsoS4B 3

Protein length

Min length 87
Max length 95
Mean length (sd) 93.9 (3.0)
Median length 95.0

Protein length distribution