Orthogroup:group_131


Homologs in group_131

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11 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18570 FBDBKF_18570 Morganella morganii S1 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
FBDBKF_19340 FBDBKF_19340 Morganella morganii S1 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
EHELCC_15145 EHELCC_15145 Morganella morganii S2 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
EHELCC_19320 EHELCC_19320 Morganella morganii S2 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
NLDBIP_15675 NLDBIP_15675 Morganella morganii S4 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
NLDBIP_19450 NLDBIP_19450 Morganella morganii S4 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
LHKJJB_16165 LHKJJB_16165 Morganella morganii S3 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
LHKJJB_19355 LHKJJB_19355 Morganella morganii S3 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
HKOGLL_15285 HKOGLL_15285 Morganella morganii S5 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
HKOGLL_19255 HKOGLL_19255 Morganella morganii S5 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
PMI_RS02600 PMI_RS02600 Proteus mirabilis HI4320 - C40 family peptidase

Distribution of group_131 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_131 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_131

Orthogroup content: 11 members

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This page summarizes the annotation of all members of the orthologous group group_131.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rri1 10
2 - 1

Product

# Product Occurence
1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif 10
2 C40 family peptidase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1310 11 O Posttranslational modification, protein turnover, chaperones (O) Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00877 11 NlpC/P60 family
PF14464 11 Prokaryotic homologs of the JAB domain

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Desampylase 1
Tail tip assembly protein K 2

Protein length

Min length 235
Max length 236
Mean length (sd) 235.5 (0.5)
Median length 236.0

Protein length distribution