PF06733


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF06733, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF06733
Description DEAD_2

Occurence in the database

PF06733 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_649 FBDBKF_02210 131952 133877 1 dinG Rad3-related DNA helicase DinG Morganella morganii S1
1 group_1169 FBDBKF_06710 4022 6130 1 dinG ATP-dependent DNA helicase DinG Morganella morganii S1
2 group_649 EHELCC_02680 519772 521697 1 dinG Rad3-related DNA helicase DinG Morganella morganii S2
3 group_1169 EHELCC_04260 180056 182164 -1 dinG ATP-dependent DNA helicase DinG Morganella morganii S2
4 group_649 NLDBIP_00780 158439 160364 -1 dinG Rad3-related DNA helicase DinG Morganella morganii S4
5 group_1169 NLDBIP_04260 179852 181960 -1 dinG ATP-dependent DNA helicase DinG Morganella morganii S4
6 group_649 LHKJJB_01255 232321 234246 1 dinG Rad3-related DNA helicase DinG Morganella morganii S3
7 group_1169 LHKJJB_10090 179966 182074 -1 dinG ATP-dependent DNA helicase DinG Morganella morganii S3
8 group_649 HKOGLL_01295 237832 239757 1 dinG Rad3-related DNA helicase DinG Morganella morganii S5
9 group_1169 HKOGLL_08885 8978 11086 1 dinG ATP-dependent DNA helicase DinG Morganella morganii S5
10 group_1169 F4V73_RS00850 176250 178349 1 dinG ATP-dependent DNA helicase DinG Morganella psychrotolerans
11 group_649 F4V73_RS04580 968660 970591 1 ATP-dependent DNA helicase Morganella psychrotolerans
12 group_1169 PMI_RS03105 684437 686545 1 dinG ATP-dependent DNA helicase DinG Proteus mirabilis HI4320
13 group_649 PMI_RS05610 1223020 1224957 1 ATP-dependent DNA helicase Proteus mirabilis HI4320