Homologs in group_649

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02210 FBDBKF_02210 91.4 Morganella morganii S1 dinG Rad3-related DNA helicase DinG
EHELCC_02680 EHELCC_02680 91.4 Morganella morganii S2 dinG Rad3-related DNA helicase DinG
NLDBIP_00780 NLDBIP_00780 91.4 Morganella morganii S4 dinG Rad3-related DNA helicase DinG
LHKJJB_01255 LHKJJB_01255 91.4 Morganella morganii S3 dinG Rad3-related DNA helicase DinG
HKOGLL_01295 HKOGLL_01295 91.4 Morganella morganii S5 dinG Rad3-related DNA helicase DinG
PMI_RS05610 PMI_RS05610 72.4 Proteus mirabilis HI4320 - ATP-dependent DNA helicase

Distribution of the homologs in the orthogroup group_649

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_649

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76257 0.0 960 71 0 631 1 yoaA ATP-dependent DNA helicase YoaA Escherichia coli (strain K12)
P44680 0.0 780 58 1 634 3 yoaA ATP-dependent DNA helicase YoaA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P9WMR5 4.44e-75 256 33 22 651 1 dinG ATP-dependent helicase DinG Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMR4 4.44e-75 256 33 22 651 3 dinG ATP-dependent helicase DinG Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5U229 4.44e-75 256 33 22 651 1 dinG ATP-dependent helicase DinG Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
P64315 4.44e-75 256 33 22 651 3 dinG ATP-dependent helicase DinG Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P29741 2.29e-63 225 30 23 680 3 dinG ATP-dependent DNA helicase DinG Photobacterium profundum (strain SS9)
Q8X7X9 1.7e-45 176 27 25 701 3 dinG ATP-dependent DNA helicase DinG Escherichia coli O157:H7
Q8FJN1 1.81e-45 175 27 25 701 3 dinG ATP-dependent DNA helicase DinG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P27296 1.96e-45 175 27 25 701 1 dinG ATP-dependent DNA helicase DinG Escherichia coli (strain K12)
Q83LU7 4.21e-45 174 27 26 701 3 dinG ATP-dependent DNA helicase DinG Shigella flexneri
Q8ZQN7 5.78e-44 171 26 27 700 3 dinG ATP-dependent DNA helicase DinG Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PG19 2.11e-43 169 26 27 700 3 dinG ATP-dependent DNA helicase DinG Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57RD7 1.49e-42 167 26 27 700 3 dinG ATP-dependent DNA helicase DinG Salmonella choleraesuis (strain SC-B67)
P50831 9.61e-38 152 26 31 645 3 ypvA Probable ATP-dependent helicase YpvA Bacillus subtilis (strain 168)
P54394 1.19e-37 153 35 4 235 3 dinG 3'-5' exonuclease DinG Bacillus subtilis (strain 168)
P54394 4.94e-23 108 27 4 241 3 dinG 3'-5' exonuclease DinG Bacillus subtilis (strain 168)
Q58352 1.34e-29 127 25 27 663 3 MJ0942 Probable ATP-dependent helicase MJ0942 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q4L6F9 3.02e-29 127 24 23 655 3 dinG 3'-5' exonuclease DinG Staphylococcus haemolyticus (strain JCSC1435)
Q8CP71 1.59e-21 103 28 6 244 3 dinG 3'-5' exonuclease DinG Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q8CP71 5.67e-10 66 25 8 220 3 dinG 3'-5' exonuclease DinG Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HP88 1.59e-21 103 28 6 244 3 dinG 3'-5' exonuclease DinG Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q5HP88 5.67e-10 66 25 8 220 3 dinG 3'-5' exonuclease DinG Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q49XR1 2.57e-19 96 26 7 263 3 dinG 3'-5' exonuclease DinG Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q49XR1 9.35e-14 78 28 8 233 3 dinG 3'-5' exonuclease DinG Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q2YY51 4.84e-19 95 33 3 153 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q2YY51 2.12e-11 70 27 8 233 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q7A5K4 1.29e-18 94 27 6 232 1 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain N315)
Q7A5K4 2.14e-11 70 27 8 233 1 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain N315)
Q99U34 1.29e-18 94 27 6 232 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q99U34 2.14e-11 70 27 8 233 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HFW8 1.29e-18 94 27 6 232 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain COL)
Q5HFW8 2.14e-11 70 27 8 233 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain COL)
Q2FYH5 1.29e-18 94 27 6 232 2 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FYH5 2.14e-11 70 27 8 233 2 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FGY5 1.29e-18 94 27 6 232 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain USA300)
Q2FGY5 2.14e-11 70 27 8 233 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain USA300)
Q6GGV4 1.71e-18 93 32 3 153 1 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MRSA252)
Q6GGV4 2.25e-11 70 27 8 233 1 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MRSA252)
Q8NWP2 2.41e-18 93 27 6 232 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MW2)
Q8NWP2 2.03e-11 70 27 8 233 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MW2)
Q6G9A7 2.41e-18 93 27 6 232 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MSSA476)
Q6G9A7 2.03e-11 70 27 8 233 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MSSA476)
A0A0P0V4R0 1.01e-06 55 28 3 133 2 RTEL1 Regulator of telomere elongation helicase 1 homolog Oryza sativa subsp. japonica
Q4JC68 2.01e-06 54 27 6 159 1 xpd ATP-dependent DNA helicase XPD Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Q55G81 0.000175 48 32 0 87 2 repD General transcription and DNA repair factor IIH helicase subunit XPD Dictyostelium discoideum
F4HQE2 0.000329 47 29 3 115 3 RTEL1 Regulator of telomere elongation helicase 1 homolog Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04580
Feature type CDS
Gene -
Product ATP-dependent DNA helicase
Location 968660 - 970591 (strand: 1)
Length 1932 (nucleotides) / 643 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_649
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00270 DEAD/DEAH box helicase
PF06733 DEAD_2
PF13307 Helicase C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1199 Replication, recombination and repair (L) L Rad3-related DNA helicase DinG

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03722 ATP-dependent DNA helicase DinG [EC:5.6.2.3] - -

Protein Sequence

MSDDFAKNGRLAQVIPGFQPREAQVTMSAAISRAIETQGQLVAEAGTGTGKTYAYLVPALRAGKKTIISTGSKALQDQLYNRDLPTIIQALDYNGKVALLKGRSNYLCLERLDQQALGDVNMDNETLSRIVSARRWASVTELGDISTCHDIPEDSPVWPLITSTNDNCLGSDCPQYKDCFVLKARRKALDADVVVVNHHLFMADRVVKDTGFGELIPEAEVIIFDEAHQIPDIASQYFGQQLSSRQLFDLTRDIIMAYRTELRDQAQLQKCADRLTMCTQDFRLALGDTGYRGNLRELLAKPHIQQAITRLDDTLELCYDVMKLSLGRSAMLDAAFERATVYRNRLKRLKDVSIPGYSYWFESYGRHFLLALTPLTVEDKFREMMSSANIAWVFTSATLSVNDDLHHFTRRLGLDSAETLILPSPFNFQEQTLLCVPRFLPVPNQYGAAKQLAEQLRPLINQNRGRCFFLCTSHQMMRDLASEFRQSLTLPVLVQGETSKSQLLSDFVSSGNALLVATSSFWEGVDVRGDALTCVIIDKLPFTAPDDPLLKARMEDCAVRGGDPFRDVQIPDAVISLKQGVGRLIRDTQDYGVIVICDSRIVMRPYGEIFLKSLPPSPRTRSLVKAAEFLAARHAQRGQISDE

Flanking regions ( +/- flanking 50bp)

CGCTCAACCCTTGGCATAATTGCGGTCTATTTTGTCAGAAGAGAACGCGCGTGTCAGACGATTTTGCAAAAAATGGCAGGTTAGCTCAGGTGATCCCCGGTTTCCAACCGCGGGAAGCGCAGGTGACCATGTCCGCCGCCATCAGCCGGGCGATTGAAACACAAGGTCAGTTGGTGGCAGAAGCCGGCACCGGGACCGGGAAAACCTACGCCTATCTGGTGCCCGCGTTGCGCGCCGGAAAGAAGACGATTATCTCCACCGGCTCGAAAGCGTTGCAGGATCAGCTCTATAACCGTGATCTCCCGACCATTATTCAGGCGCTGGACTATAACGGCAAAGTCGCGCTGCTGAAAGGACGCTCGAATTACCTTTGTCTGGAGCGGCTGGATCAGCAGGCGCTCGGTGATGTCAATATGGATAATGAAACGCTGAGCCGGATAGTCTCAGCGCGGCGCTGGGCAAGCGTGACTGAACTGGGTGACATCAGCACCTGCCATGATATTCCGGAAGACAGTCCGGTCTGGCCGCTGATTACCAGCACCAATGATAATTGCCTCGGCAGTGACTGTCCGCAATATAAAGACTGTTTTGTTCTGAAAGCCAGGCGCAAGGCGCTGGATGCGGACGTGGTGGTGGTAAACCATCATCTGTTTATGGCTGATCGGGTGGTGAAAGATACCGGGTTCGGGGAATTAATCCCGGAAGCGGAAGTGATTATTTTCGATGAAGCGCATCAGATTCCGGATATCGCCAGCCAGTATTTCGGTCAGCAACTCAGCAGCCGCCAGTTATTTGATCTCACGCGCGATATCATTATGGCTTACCGGACAGAGCTGCGCGACCAGGCGCAACTGCAAAAATGTGCAGATCGCCTGACTATGTGCACACAGGATTTCCGTCTGGCGCTGGGGGATACCGGTTATCGTGGTAATCTGCGCGAATTACTGGCAAAGCCGCATATTCAGCAGGCGATAACCCGCCTCGATGATACGCTGGAACTCTGTTATGACGTGATGAAACTGTCTCTCGGGCGCTCCGCAATGCTGGATGCGGCTTTTGAGCGGGCAACGGTTTACCGTAACCGGCTGAAACGCCTGAAAGACGTTTCCATTCCGGGATACAGTTACTGGTTTGAAAGTTACGGACGTCACTTCCTGCTGGCACTGACACCGCTCACGGTGGAAGATAAATTCCGTGAAATGATGAGTAGTGCGAATATCGCCTGGGTGTTTACGTCCGCGACACTGTCCGTCAATGACGATCTTCATCATTTTACCCGCCGTCTGGGGCTGGACAGCGCGGAAACCCTTATTCTGCCGAGTCCGTTTAATTTTCAGGAACAAACGTTACTGTGTGTCCCGCGTTTTCTGCCGGTGCCGAATCAGTACGGCGCGGCAAAGCAACTGGCGGAACAACTCAGACCGCTTATCAACCAGAATCGCGGGCGCTGCTTCTTTTTATGTACCTCACATCAGATGATGCGCGACCTCGCATCAGAATTTCGTCAGTCACTGACATTGCCGGTACTTGTTCAGGGCGAAACCAGTAAGAGTCAGTTACTCAGTGATTTTGTCTCATCCGGAAATGCATTGCTGGTTGCAACCAGCAGTTTCTGGGAAGGTGTGGATGTGCGTGGTGATGCACTGACCTGTGTCATTATCGACAAACTGCCGTTTACGGCCCCGGACGATCCGCTGCTGAAAGCCCGGATGGAAGATTGCGCAGTGCGGGGCGGTGATCCGTTTCGTGATGTGCAAATCCCTGATGCGGTAATAAGCCTTAAACAGGGCGTCGGGCGGCTGATACGTGATACGCAGGATTATGGCGTGATTGTTATCTGTGACAGCAGGATCGTTATGCGCCCTTATGGTGAAATCTTCCTGAAAAGCCTGCCGCCTTCACCCCGCACACGTTCACTGGTGAAAGCCGCTGAATTTCTGGCCGCCCGGCATGCGCAGCGCGGGCAGATATCTGACGAATAATCGCAAGAATGATCACTTATCAGGGTAAATATTCTGTCATGATGATTTTT