Homologs in group_1169

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06710 FBDBKF_06710 92.6 Morganella morganii S1 dinG ATP-dependent DNA helicase DinG
EHELCC_04260 EHELCC_04260 92.6 Morganella morganii S2 dinG ATP-dependent DNA helicase DinG
NLDBIP_04260 NLDBIP_04260 92.6 Morganella morganii S4 dinG ATP-dependent DNA helicase DinG
LHKJJB_10090 LHKJJB_10090 92.6 Morganella morganii S3 dinG ATP-dependent DNA helicase DinG
HKOGLL_08885 HKOGLL_08885 92.6 Morganella morganii S5 dinG ATP-dependent DNA helicase DinG
PMI_RS03105 PMI_RS03105 72.5 Proteus mirabilis HI4320 dinG ATP-dependent DNA helicase DinG

Distribution of the homologs in the orthogroup group_1169

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1169

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZQN7 0.0 919 63 1 698 3 dinG ATP-dependent DNA helicase DinG Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57RD7 0.0 917 63 1 698 3 dinG ATP-dependent DNA helicase DinG Salmonella choleraesuis (strain SC-B67)
Q5PG19 0.0 915 63 1 698 3 dinG ATP-dependent DNA helicase DinG Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P27296 0.0 905 62 1 698 1 dinG ATP-dependent DNA helicase DinG Escherichia coli (strain K12)
Q83LU7 0.0 904 62 1 698 3 dinG ATP-dependent DNA helicase DinG Shigella flexneri
Q8FJN1 0.0 904 62 1 698 3 dinG ATP-dependent DNA helicase DinG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X7X9 0.0 904 62 1 698 3 dinG ATP-dependent DNA helicase DinG Escherichia coli O157:H7
P29741 9.27e-110 350 34 18 711 3 dinG ATP-dependent DNA helicase DinG Photobacterium profundum (strain SS9)
P76257 1.67e-53 198 28 24 697 1 yoaA ATP-dependent DNA helicase YoaA Escherichia coli (strain K12)
P44680 1.55e-44 172 27 30 699 3 yoaA ATP-dependent DNA helicase YoaA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P9WMR5 3.79e-40 160 28 24 681 1 dinG ATP-dependent helicase DinG Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMR4 3.79e-40 160 28 24 681 3 dinG ATP-dependent helicase DinG Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5U229 3.79e-40 160 28 24 681 1 dinG ATP-dependent helicase DinG Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
P64315 3.79e-40 160 28 24 681 3 dinG ATP-dependent helicase DinG Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P50831 1.35e-20 100 24 29 691 3 ypvA Probable ATP-dependent helicase YpvA Bacillus subtilis (strain 168)
P54394 5.21e-20 99 31 7 242 3 dinG 3'-5' exonuclease DinG Bacillus subtilis (strain 168)
P54394 1.78e-17 90 30 12 263 3 dinG 3'-5' exonuclease DinG Bacillus subtilis (strain 168)
Q58352 2.5e-17 89 22 28 685 3 MJ0942 Probable ATP-dependent helicase MJ0942 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q8CP71 7.41e-14 79 21 23 692 3 dinG 3'-5' exonuclease DinG Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HP88 7.41e-14 79 21 23 692 3 dinG 3'-5' exonuclease DinG Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q49XR1 1.26e-13 78 20 22 654 3 dinG 3'-5' exonuclease DinG Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q8NWP2 9.45e-06 52 21 10 308 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MW2)
Q6G9A7 9.45e-06 52 21 10 308 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MSSA476)
Q6GGV4 2.18e-05 51 21 10 308 1 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MRSA252)
Q7A5K4 2.34e-05 51 21 10 308 1 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain N315)
Q99U34 2.34e-05 51 21 10 308 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HFW8 2.34e-05 51 21 10 308 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain COL)
Q2FYH5 2.34e-05 51 21 10 308 2 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FGY5 2.34e-05 51 21 10 308 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain USA300)
Q2YY51 2.66e-05 51 21 10 308 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q4L6F9 0.000156 48 26 3 164 3 dinG 3'-5' exonuclease DinG Staphylococcus haemolyticus (strain JCSC1435)
P26659 0.001 46 22 10 279 1 rad15 General transcription and DNA repair factor IIH helicase subunit XPD Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00850
Feature type CDS
Gene dinG
Product ATP-dependent DNA helicase DinG
Location 176250 - 178349 (strand: 1)
Length 2100 (nucleotides) / 699 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1169
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00270 DEAD/DEAH box helicase
PF06733 DEAD_2
PF13307 Helicase C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1199 Replication, recombination and repair (L) L Rad3-related DNA helicase DinG

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03722 ATP-dependent DNA helicase DinG [EC:5.6.2.3] - -

Protein Sequence

MPLSATVKQQISAWYKALPEQIDGFVPRAPQRDMIAEVARTMAGDEGRHLVIEAPTGVGKTLSYLIPGIAVAREQQKLLVISTANVALQDQIYSKDLPLLAKIIPDLKFTGAFGRGRYVCPRNMAVIGAAEGEQIDLMLLLEDKADVATASERDTVRQLQNDFTSFGWDGLRDHHKKSIPDSLWRKISTDKLSCLGRNCQFYTRCPFFLARREIDTVDVVVANHALVMAAMANESVLPESKKLLLVLDEGHHIADVARDTLEVEGDITLTSLQAQLDNLAKFVTQYIQQFRPVKPPKLADSARLQKHLEVMLDTYRDVAMYTQALLPERATDPHYLFPLGELPEPLMNAAQQLSKQTDALHVMVEAILSDLNEQTAKQDIVRLHKAILTGGKMLGALENMRKLWRQAAMSEISHAPVSKWLSRRYEKNQSHLWFHCAGIRVSEQLGQLLWRNVPHIVVTSATLRSLNSFSRLQEMTGLSEKADDRFVSLGSPFDHCRQGRLVIPQMQYEPTLTDEAAHIEEMARYFRRQIESGEHRGMLVLFNSQRAMDLFLTHVTDLRLQLLVQGDQPRYRLVETHCQRIRDGQDSVLIGLHSFAEGLDLKGDYLTQVHIHKIAFPPVTNPVIITENEWLKSLNRYPFEVQSLPSASFTLIQQVGRLIRSNQCHGDVVIYDKRLLTKRYGSRLLNALPVFPIVRPEID

Flanking regions ( +/- flanking 50bp)

GCTGTAGTGTGAAACAATAGCCCCCTGTTTATTTATCCATAGGTTTTCTGATGCCCCTCTCCGCCACTGTCAAACAACAAATCAGCGCCTGGTATAAAGCTTTGCCGGAGCAGATTGACGGCTTTGTTCCGCGTGCACCACAGCGGGATATGATAGCGGAAGTGGCGCGGACGATGGCAGGCGATGAAGGGCGTCATCTGGTTATTGAGGCCCCGACCGGTGTGGGAAAAACATTATCATATCTTATTCCGGGTATTGCGGTGGCGCGGGAACAGCAAAAATTACTGGTGATAAGTACCGCAAACGTGGCATTGCAGGATCAAATTTACAGCAAAGATTTACCGCTGCTGGCAAAAATTATCCCTGATCTGAAATTTACCGGCGCATTCGGACGCGGGCGCTACGTCTGCCCGCGCAATATGGCGGTGATTGGTGCTGCGGAAGGTGAGCAGATTGATTTGATGCTGCTGCTGGAAGATAAAGCCGATGTGGCAACCGCGTCTGAGCGCGATACGGTGCGGCAGTTACAGAATGATTTCACGTCATTCGGCTGGGACGGTCTGCGGGATCATCATAAAAAATCTATTCCGGACAGTTTGTGGCGCAAAATCAGCACCGATAAACTCAGTTGCCTCGGACGTAACTGTCAGTTTTATACACGCTGCCCGTTCTTTCTGGCGCGGCGTGAAATCGACACTGTCGATGTGGTGGTCGCCAACCATGCGCTGGTCATGGCGGCGATGGCGAATGAATCCGTCCTGCCGGAAAGTAAGAAATTACTGCTGGTGCTGGATGAAGGTCACCATATTGCCGATGTTGCCCGGGATACACTGGAAGTGGAAGGGGATATCACGCTTACTTCACTTCAGGCGCAGCTTGATAATCTGGCTAAGTTTGTTACACAGTATATTCAGCAGTTCCGCCCCGTAAAACCGCCGAAACTGGCAGACAGTGCGCGCCTGCAAAAGCATCTTGAGGTTATGCTGGATACGTACCGCGATGTGGCGATGTACACACAGGCATTGTTACCGGAACGCGCAACTGATCCGCACTATCTTTTCCCGCTCGGAGAGTTGCCTGAGCCGCTGATGAATGCCGCGCAGCAGCTGTCAAAACAGACTGATGCCTTGCATGTCATGGTGGAAGCCATTCTCAGCGACCTGAATGAACAAACGGCAAAACAGGATATCGTGCGTCTGCACAAAGCCATTCTGACCGGCGGAAAAATGCTGGGCGCGCTGGAAAATATGCGCAAATTGTGGCGTCAGGCGGCAATGTCGGAAATTTCACATGCGCCGGTTTCGAAATGGCTCAGCCGCCGCTATGAAAAAAATCAGTCACATCTGTGGTTTCACTGCGCGGGGATCCGCGTCAGTGAACAGCTCGGGCAGTTGTTGTGGCGCAATGTGCCGCATATTGTGGTGACATCCGCCACACTCCGTTCTCTTAACAGTTTCAGCCGCCTTCAGGAGATGACCGGGCTGAGTGAAAAAGCTGATGATCGCTTTGTCTCTCTCGGGTCGCCGTTTGATCACTGCCGCCAGGGACGTCTGGTTATTCCGCAGATGCAATATGAGCCGACACTGACAGATGAAGCGGCGCATATTGAAGAGATGGCACGTTATTTCCGCAGGCAGATTGAGTCCGGTGAGCACCGTGGCATGTTGGTTCTGTTTAACAGTCAGCGGGCAATGGATCTCTTTCTGACCCATGTGACGGACTTGCGGCTGCAATTACTGGTTCAGGGCGACCAACCCCGCTACCGGTTGGTGGAAACGCACTGTCAGCGGATACGTGACGGGCAGGACAGTGTATTAATTGGCTTGCACTCTTTTGCTGAAGGGCTTGATCTGAAAGGGGATTATCTGACACAGGTACACATTCATAAAATTGCATTTCCGCCGGTAACCAACCCCGTGATTATTACTGAAAATGAGTGGCTGAAGTCTCTGAACCGCTATCCGTTTGAAGTACAAAGTCTGCCGAGTGCCTCTTTCACACTGATTCAGCAGGTCGGGCGGCTTATCCGCAGTAATCAGTGTCATGGTGATGTGGTGATTTATGATAAACGCCTGCTGACGAAACGTTATGGCAGCCGGTTACTTAATGCCTTGCCGGTCTTTCCGATTGTGCGCCCGGAGATTGATTAGAGAAAGAAAACGGACATCCGTTGTCCGGTGAGATCCGGTGTGTGGTATTA