Homologs in group_649

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02210 FBDBKF_02210 73.1 Morganella morganii S1 dinG Rad3-related DNA helicase DinG
EHELCC_02680 EHELCC_02680 73.1 Morganella morganii S2 dinG Rad3-related DNA helicase DinG
NLDBIP_00780 NLDBIP_00780 73.1 Morganella morganii S4 dinG Rad3-related DNA helicase DinG
LHKJJB_01255 LHKJJB_01255 73.1 Morganella morganii S3 dinG Rad3-related DNA helicase DinG
HKOGLL_01295 HKOGLL_01295 73.1 Morganella morganii S5 dinG Rad3-related DNA helicase DinG
F4V73_RS04580 F4V73_RS04580 72.4 Morganella psychrotolerans - ATP-dependent DNA helicase

Distribution of the homologs in the orthogroup group_649

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_649

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76257 0.0 931 68 0 636 1 yoaA ATP-dependent DNA helicase YoaA Escherichia coli (strain K12)
P44680 0.0 773 58 1 634 3 yoaA ATP-dependent DNA helicase YoaA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P9WMR5 5.36e-71 245 31 18 637 1 dinG ATP-dependent helicase DinG Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMR4 5.36e-71 245 31 18 637 3 dinG ATP-dependent helicase DinG Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5U229 5.36e-71 245 31 18 637 1 dinG ATP-dependent helicase DinG Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
P64315 5.36e-71 245 31 18 637 3 dinG ATP-dependent helicase DinG Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P54394 6.12e-68 242 28 18 671 3 dinG 3'-5' exonuclease DinG Bacillus subtilis (strain 168)
P29741 4.07e-61 219 27 22 682 3 dinG ATP-dependent DNA helicase DinG Photobacterium profundum (strain SS9)
Q8X7X9 3.42e-47 180 27 29 695 3 dinG ATP-dependent DNA helicase DinG Escherichia coli O157:H7
P27296 3.95e-47 180 27 29 695 1 dinG ATP-dependent DNA helicase DinG Escherichia coli (strain K12)
Q8FJN1 4.23e-47 180 27 29 695 3 dinG ATP-dependent DNA helicase DinG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q5PG19 6.65e-47 179 27 30 686 3 dinG ATP-dependent DNA helicase DinG Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8ZQN7 7.25e-47 179 27 30 686 3 dinG ATP-dependent DNA helicase DinG Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57RD7 1.49e-46 178 27 30 686 3 dinG ATP-dependent DNA helicase DinG Salmonella choleraesuis (strain SC-B67)
Q83LU7 2.05e-46 178 27 29 695 3 dinG ATP-dependent DNA helicase DinG Shigella flexneri
P50831 1.74e-40 160 26 21 620 3 ypvA Probable ATP-dependent helicase YpvA Bacillus subtilis (strain 168)
Q8CP71 3.9e-36 149 24 22 652 3 dinG 3'-5' exonuclease DinG Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HP88 3.9e-36 149 24 22 652 3 dinG 3'-5' exonuclease DinG Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q2YY51 4.56e-36 148 23 20 647 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q7A5K4 1.04e-35 147 23 20 647 1 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain N315)
Q99U34 1.04e-35 147 23 20 647 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HFW8 1.04e-35 147 23 20 647 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain COL)
Q2FYH5 1.04e-35 147 23 20 647 2 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FGY5 1.04e-35 147 23 20 647 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain USA300)
Q6GGV4 1.28e-35 147 23 20 647 1 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MRSA252)
Q8NWP2 1.98e-35 146 23 20 647 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MW2)
Q6G9A7 1.98e-35 146 23 20 647 3 dinG 3'-5' exonuclease DinG Staphylococcus aureus (strain MSSA476)
Q4L6F9 2.02e-31 134 24 21 656 3 dinG 3'-5' exonuclease DinG Staphylococcus haemolyticus (strain JCSC1435)
Q58352 1.58e-21 102 24 26 648 3 MJ0942 Probable ATP-dependent helicase MJ0942 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q49XR1 1.69e-18 93 27 7 246 3 dinG 3'-5' exonuclease DinG Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q49XR1 6.21e-15 82 31 7 203 3 dinG 3'-5' exonuclease DinG Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q9HM14 1.62e-08 61 21 25 600 1 Ta0057 ATP-dependent DNA helicase XPD Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
A0A0P0V4R0 3.77e-07 57 33 1 92 2 RTEL1 Regulator of telomere elongation helicase 1 homolog Oryza sativa subsp. japonica
Q4JC68 2.93e-06 53 26 6 162 1 xpd ATP-dependent DNA helicase XPD Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
B4L1Z2 9.16e-06 52 36 2 87 3 GI15901 Regulator of telomere elongation helicase 1 homolog Drosophila mojavensis
B4NDG5 2.72e-05 51 35 2 87 3 GK24923 Regulator of telomere elongation helicase 1 homolog Drosophila willistoni
F4HQE2 4.51e-05 50 33 2 92 3 RTEL1 Regulator of telomere elongation helicase 1 homolog Arabidopsis thaliana
Q29FS3 5.1e-05 50 35 2 87 3 GA17940 Regulator of telomere elongation helicase 1 homolog Drosophila pseudoobscura pseudoobscura
B4GU19 5.23e-05 50 35 2 87 3 GL14463 Regulator of telomere elongation helicase 1 homolog Drosophila persimilis
Q55G81 5.3e-05 50 35 1 102 2 repD General transcription and DNA repair factor IIH helicase subunit XPD Dictyostelium discoideum
B4PZB4 8.18e-05 49 35 2 87 3 GE16425 Regulator of telomere elongation helicase 1 homolog Drosophila yakuba
Q9W484 8.83e-05 49 35 2 87 1 Rtel1 Regulator of telomere elongation helicase 1 homolog Drosophila melanogaster
B4I0K4 8.94e-05 49 35 2 87 3 GM12432 Regulator of telomere elongation helicase 1 homolog Drosophila sechellia
B3NSW1 9.14e-05 49 35 2 87 3 GG18780 Regulator of telomere elongation helicase 1 homolog Drosophila erecta
B4M891 9.34e-05 49 35 2 87 3 GJ16649 Regulator of telomere elongation helicase 1 homolog Drosophila virilis
B3MSG8 0.000117 49 35 2 87 3 GF20802 Regulator of telomere elongation helicase 1 homolog Drosophila ananassae
B4JNS2 0.000122 49 35 2 87 3 GH24089 Regulator of telomere elongation helicase 1 homolog Drosophila grimshawi

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05610
Feature type CDS
Gene -
Product ATP-dependent DNA helicase
Location 1223020 - 1224957 (strand: 1)
Length 1938 (nucleotides) / 645 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_649
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06733 DEAD_2
PF13307 Helicase C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1199 Replication, recombination and repair (L) L Rad3-related DNA helicase DinG

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03722 ATP-dependent DNA helicase DinG [EC:5.6.2.3] - -

Protein Sequence

MPVSDDFAENGILTRRVPGFHPREAQRQMAISVTEVIDKQGVLIAEAGTGTGKTYAYLVPALRSGKKTIISTGSKALQDQLYSRDLPTIIEALDYDGTTALLKGRSNYLCLERLDQQMLSGGDLEAEVLADVMHVRQWSTQTEDGDISRCHSVAEDSKVWPLVTSTNDNCLGSDCPRYKECYVLSARKNALAADVVVVNHHLFMADTVVKDTGFGELIPDAEIMIFDEAHQIPDIASHYFGQQLTSRQLFDLARDMIVAYRTEVRDQVQLQKSADRLTQMVQDFRLSLGDTGFRGNLRELLQNKETKRYLTFLDDALELSYDVMKLSLGRSQLLDSAFERATLYRNRLKRLIDTTIAGYSYWFESYGRHFLLAITPLSVADKFRELIKSHKSSWIFTSATLSVDEKMSYYTDRLGLENATTLILNSPFDYQHQTLLCVPRYLPPLNQPYTAKRLAAMLAPVILKNQGRCFFLCTSHAMMRGLAEEFKASLPLPVLMQGEMGKSQLLKKFVSSGNALLVATQSFWEGVDVRGDTLSCVIIDKLPFTAPDDPLLRARIEDCQLRGGDAFRDVQIPDAVITLKQGVGRLIRDIHDYGAIIVCDDRLVSRPYGEVFLSSLPPSPRTRSLEKTSYFLSQRAQRNEIVSES

Flanking regions ( +/- flanking 50bp)

ACTTTTAGCTATCCACTGGCATAATTTACGTCTTATTTTATAAAAAGAGTATGCCTGTGTCAGACGATTTTGCAGAAAACGGGATTTTAACCCGACGCGTTCCTGGATTTCATCCCCGTGAAGCTCAACGACAAATGGCGATATCAGTAACAGAGGTTATTGATAAACAAGGTGTGCTTATTGCAGAAGCGGGGACCGGGACAGGGAAAACCTATGCCTATCTTGTGCCTGCATTACGTTCTGGGAAAAAAACTATCATCTCTACCGGATCTAAGGCATTACAAGATCAACTGTATAGTCGTGATCTCCCCACCATAATAGAAGCGCTAGACTACGATGGTACAACGGCTTTATTAAAAGGTCGCTCTAATTATTTGTGTTTAGAACGTTTAGATCAGCAAATGCTCAGTGGCGGTGATTTAGAAGCAGAAGTACTTGCTGATGTTATGCATGTACGCCAATGGTCAACGCAAACAGAAGATGGTGATATTAGTCGCTGTCATAGTGTGGCGGAAGATAGCAAAGTATGGCCATTGGTGACTAGCACTAATGATAATTGTCTGGGCAGTGATTGTCCTCGCTACAAAGAGTGTTATGTATTAAGTGCCCGTAAAAATGCGTTAGCCGCTGATGTGGTGGTTGTTAATCATCACCTTTTTATGGCAGATACGGTAGTAAAAGATACTGGTTTTGGTGAGCTGATCCCCGATGCGGAGATAATGATCTTCGATGAGGCGCATCAAATTCCTGATATAGCGAGCCACTACTTCGGTCAACAGCTCACTAGTCGTCAATTATTCGATCTAGCGCGAGATATGATTGTGGCGTATCGCACTGAAGTGCGTGATCAAGTGCAACTGCAAAAAAGTGCTGACCGTTTAACTCAAATGGTACAAGATTTTCGTCTTAGCTTAGGTGATACGGGTTTTCGGGGTAACTTAAGGGAACTATTACAAAATAAGGAAACCAAACGCTATTTAACCTTCTTAGATGATGCGTTAGAGCTAAGTTATGATGTAATGAAGCTCTCTTTAGGGCGTAGCCAATTACTGGATAGTGCGTTTGAACGGGCAACACTTTATCGTAATCGTTTAAAACGCCTAATTGATACGACGATTGCCGGATACAGTTATTGGTTTGAAAGCTATGGTCGTCATTTTTTACTGGCGATCACGCCACTTTCGGTTGCTGATAAATTTCGTGAGCTGATTAAGTCCCATAAAAGTAGTTGGATATTTACTTCTGCAACACTCTCTGTAGATGAAAAAATGTCTTATTACACAGATAGATTAGGACTGGAAAATGCCACGACATTAATTTTAAATAGCCCATTTGATTATCAACATCAAACGTTGCTCTGTGTACCACGTTATTTACCTCCGTTAAATCAACCATACACCGCGAAGCGTTTAGCCGCTATGCTGGCTCCTGTGATCTTAAAAAATCAGGGGCGTTGTTTTTTTCTTTGTACCTCTCACGCTATGATGCGTGGATTAGCCGAAGAGTTTAAAGCCAGCTTACCACTTCCCGTGTTAATGCAAGGCGAAATGGGGAAATCGCAATTATTGAAAAAATTTGTTTCCTCAGGCAATGCGTTACTTGTCGCGACCCAAAGTTTTTGGGAAGGGGTGGATGTCAGGGGAGATACACTTTCTTGTGTGATCATTGATAAATTACCCTTTACCGCACCTGACGATCCATTATTAAGAGCACGTATTGAAGATTGTCAATTACGTGGTGGTGATGCATTTCGGGATGTACAAATCCCTGATGCGGTGATCACTCTAAAGCAAGGCGTCGGGCGTTTGATCCGCGATATACATGACTATGGTGCCATTATTGTTTGTGATGATAGATTAGTTTCAAGGCCTTATGGGGAAGTGTTTTTAAGTAGTTTGCCCCCATCACCACGAACCCGTTCATTAGAAAAAACCAGTTATTTTTTAAGCCAACGGGCACAACGAAATGAAATAGTGTCGGAGTCATAATAGTGATTACATATGATGTGTATTTATTCTGTTGAATACTATTATGATAT