PF06530


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF06530, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 16 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF06530
Description Phage antitermination protein Q

Occurence in the database

PF06530 is associated with 16 different proteins (see tab "Protein list" and "Profile")
The 16 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_107 FBDBKF_00185 30935 31372 -1 Phage antitermination protein Q Morganella morganii S1
1 group_107 FBDBKF_12355 642 1082 -1 Antitermination protein Q Morganella morganii S1
2 group_107 FBDBKF_12850 74936 75469 -1 Phage antitermination protein Q Morganella morganii S1
3 group_3499 FBDBKF_17305 38491 38922 -1 Antitermination protein Q Morganella morganii S1
4 group_107 EHELCC_01360 277496 277933 1 Phage antitermination protein Q Morganella morganii S2
5 group_3499 EHELCC_01585 316579 317010 1 Antitermination protein Q Morganella morganii S2
6 group_3499 NLDBIP_01875 363126 363557 -1 Antitermination protein Q Morganella morganii S4
7 group_107 NLDBIP_02100 402203 402640 -1 Phage antitermination protein Q Morganella morganii S4
8 group_3499 LHKJJB_00160 29128 29559 1 Antitermination protein Q Morganella morganii S3
9 group_107 LHKJJB_03615 9444 9881 -1 Phage antitermination protein Q Morganella morganii S3
10 group_3499 HKOGLL_00200 34639 35070 1 Antitermination protein Q Morganella morganii S5
11 group_107 HKOGLL_03430 277701 278138 1 Phage antitermination protein Q Morganella morganii S5
12 group_107 F4V73_RS06180 1301099 1301602 -1 antiterminator Q family protein Morganella psychrotolerans
13 group_107 PMI_RS04475 995439 995837 1 antiterminator Q family protein Proteus mirabilis HI4320
14 group_107 PMI_RS04675 1033009 1033407 1 antiterminator Q family protein Proteus mirabilis HI4320
15 group_107 PMI_RS04845 1062555 1062938 1 antiterminator Q family protein Proteus mirabilis HI4320