PF05591


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF05591
Protein list: lists the 11 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF05591
Description Type VI secretion system, VipA, VC_A0107 or Hcp2

Occurence in the database

PF05591 is associated with 11 different proteins
The 11 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_108 FBDBKF_01290 249130 249627 1 tssB type VI secretion system contractile sheath small subunit Morganella morganii S1
1 group_108 EHELCC_00255 59241 59738 -1 tssB type VI secretion system contractile sheath small subunit Morganella morganii S2
2 group_108 NLDBIP_03205 620398 620895 1 tssB type VI secretion system contractile sheath small subunit Morganella morganii S4
3 group_108 LHKJJB_04720 227639 228136 1 tssB type VI secretion system contractile sheath small subunit Morganella morganii S3
4 group_108 HKOGLL_02325 59446 59943 -1 tssB type VI secretion system contractile sheath small subunit Morganella morganii S5
5 group_108 F4V73_RS00095 24172 24729 -1 tssB type VI secretion system contractile sheath small subunit Morganella psychrotolerans
6 group_108 F4V73_RS02380 506391 506888 -1 tssB type VI secretion system contractile sheath small subunit Morganella psychrotolerans
7 group_108 F4V73_RS07025 1459440 1459949 -1 tssB type VI secretion system contractile sheath small subunit Morganella psychrotolerans
8 group_108 F4V73_RS09365 1971009 1971542 -1 tssB type VI secretion system contractile sheath small subunit Morganella psychrotolerans
9 group_108 F4V73_RS16870 203351 203848 -1 tssB type VI secretion system contractile sheath small subunit Morganella psychrotolerans
10 group_108 PMI_RS03685 829313 829813 -1 tssB type VI secretion system contractile sheath small subunit Proteus mirabilis HI4320