PF04976


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04976, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 23 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04976
Description DMSO reductase anchor subunit (DmsC)

Occurence in the database

PF04976 is associated with 23 different proteins (see tab "Protein list" and "Profile")
The 23 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1313 FBDBKF_08080 155382 156284 1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S1
1 group_1602 FBDBKF_10460 48958 49818 1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S1
2 group_2926 FBDBKF_14025 101956 102810 -1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S1
3 group_2926 EHELCC_11700 186832 187686 -1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S2
4 group_1313 EHELCC_13910 129576 130478 1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S2
5 group_1602 EHELCC_14795 48948 49808 1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S2
6 group_2926 NLDBIP_12040 186832 187686 -1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S4
7 group_1313 NLDBIP_14355 150451 151353 1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S4
8 group_1602 NLDBIP_14625 48948 49808 1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S4
9 group_1313 LHKJJB_08495 8396 9298 -1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S3
10 group_2926 LHKJJB_11900 186832 187686 -1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S3
11 group_1602 LHKJJB_14720 91918 92778 -1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S3
12 group_1313 HKOGLL_08045 8396 9298 -1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S5
13 group_2926 HKOGLL_10515 186832 187686 -1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S5
14 group_1602 HKOGLL_13340 91918 92778 -1 dmsC DMSO reductase anchor subunit DmsC Morganella morganii S5
15 group_3726 F4V73_RS05060 1077431 1078303 -1 DmsC/YnfH family molybdoenzyme membrane anchor subunit Morganella psychrotolerans
16 group_2926 F4V73_RS12875 180081 180935 -1 DmsC/YnfH family molybdoenzyme membrane anchor subunit Morganella psychrotolerans
17 group_1313 F4V73_RS12915 189443 190354 -1 DmsC/YnfH family molybdoenzyme membrane anchor subunit Morganella psychrotolerans
18 group_1602 F4V73_RS14160 47258 48118 1 DmsC/YnfH family molybdoenzyme membrane anchor subunit Morganella psychrotolerans
19 group_3726 PMI_RS00815 204845 205657 -1 dimethyl sulfoxide reductase anchor subunit Proteus mirabilis HI4320
20 group_3726 PMI_RS05820 1273654 1274526 1 dimethyl sulfoxide reductase anchor subunit Proteus mirabilis HI4320
21 group_1602 PMI_RS08355 1825858 1826634 1 dimethyl sulfoxide reductase anchor subunit Proteus mirabilis HI4320
22 group_1313 PMI_RS14665 3250252 3251151 1 dimethyl sulfoxide reductase anchor subunit Proteus mirabilis HI4320