Homologs in group_1602

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10460 FBDBKF_10460 88.5 Morganella morganii S1 dmsC DMSO reductase anchor subunit DmsC
EHELCC_14795 EHELCC_14795 88.5 Morganella morganii S2 dmsC DMSO reductase anchor subunit DmsC
NLDBIP_14625 NLDBIP_14625 88.5 Morganella morganii S4 dmsC DMSO reductase anchor subunit DmsC
LHKJJB_14720 LHKJJB_14720 88.5 Morganella morganii S3 dmsC DMSO reductase anchor subunit DmsC
HKOGLL_13340 HKOGLL_13340 88.5 Morganella morganii S5 dmsC DMSO reductase anchor subunit DmsC
PMI_RS08355 PMI_RS08355 33.3 Proteus mirabilis HI4320 - dimethyl sulfoxide reductase anchor subunit

Distribution of the homologs in the orthogroup group_1602

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1602

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P18777 4.3e-95 285 55 1 284 1 dmsC Anaerobic dimethyl sulfoxide reductase chain C Escherichia coli (strain K12)
P76173 1.87e-89 270 53 2 283 3 ynfH Anaerobic dimethyl sulfoxide reductase chain YnfH Escherichia coli (strain K12)
P45002 3.5e-67 213 43 5 285 3 dmsC Anaerobic dimethyl sulfoxide reductase chain C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14160
Feature type CDS
Gene -
Product DmsC/YnfH family molybdoenzyme membrane anchor subunit
Location 47258 - 48118 (strand: 1)
Length 861 (nucleotides) / 286 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1602
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04976 DMSO reductase anchor subunit (DmsC)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3302 Energy production and conversion (C) C DMSO reductase anchor subunit DmsC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07308 anaerobic dimethyl sulfoxide reductase subunit C Sulfur metabolism
Metabolic pathways		 -

Protein Sequence

MGSGIHEWPLMFFTTLGQSVAGAFIIMAAVLLSGKLTPEMNRKVHYSMFGLWVLMGIGFLLSMMHMGTPMRAFNAFNRLGSSSLSNEIAAGSVFFAAGGFYWLLAVLNKMPAALGKLWLVVVMILAVVFIYAIPQVYQIATVPTWNTPYTTIHFVLTALLGGPLLAALLLRMAGFDLRCISWLPVVSIIALVASVIAVTAQGFDLGGIRSSVQNASALVPEFGMFMGWRMVLLALGLACWVLPLVRRANPPVIMMLAGFVLVLGGEIIGRGIFYGLHMTVGMAYLA

Flanking regions ( +/- flanking 50bp)

TCCTGTCGGGGATACCACAGGCCATCTGGCGAACCCGGAGGAGGTATAACATGGGATCGGGAATTCATGAATGGCCGCTGATGTTCTTTACCACTCTGGGTCAGAGTGTGGCGGGTGCGTTTATCATCATGGCAGCAGTGCTGCTGTCCGGGAAGCTCACCCCTGAGATGAACCGGAAAGTGCATTACAGTATGTTCGGGCTCTGGGTATTGATGGGGATTGGTTTTCTGCTCTCCATGATGCACATGGGTACGCCGATGCGTGCATTTAATGCCTTTAACCGTCTGGGCAGTTCATCGCTCAGTAATGAAATTGCCGCAGGTTCGGTCTTTTTCGCGGCAGGCGGGTTTTACTGGCTGCTGGCGGTGCTGAATAAGATGCCTGCTGCTCTCGGCAAGCTCTGGCTGGTGGTGGTGATGATACTGGCGGTGGTGTTTATTTACGCCATTCCGCAGGTGTATCAGATTGCCACAGTGCCGACCTGGAACACACCTTACACCACTATCCACTTTGTACTGACGGCATTGCTGGGCGGTCCGCTGCTTGCTGCTCTGTTGTTGCGCATGGCGGGGTTTGACCTGCGCTGCATCAGCTGGTTGCCGGTGGTGAGTATTATTGCGCTGGTGGCGAGTGTGATTGCGGTAACGGCGCAGGGCTTTGATCTGGGCGGCATCCGCAGTTCTGTTCAGAATGCATCTGCGCTGGTGCCGGAGTTCGGTATGTTTATGGGCTGGCGTATGGTCTTACTGGCGCTGGGTCTGGCATGCTGGGTTCTGCCGCTGGTCAGACGCGCTAATCCGCCGGTTATCATGATGCTTGCCGGTTTTGTGCTGGTGCTGGGCGGTGAAATCATCGGGCGCGGTATTTTTTATGGTCTGCACATGACTGTCGGGATGGCTTATCTCGCCTGATACAGTGAATGCGTATCCTGTTACTGTTACCCGGTCGTAAACCGTGGCAG