Homologs in group_301

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10460 FBDBKF_10460 29.2 Morganella morganii S1 dmsC DMSO reductase anchor subunit DmsC
EHELCC_14795 EHELCC_14795 29.2 Morganella morganii S2 dmsC DMSO reductase anchor subunit DmsC
NLDBIP_14625 NLDBIP_14625 29.2 Morganella morganii S4 dmsC DMSO reductase anchor subunit DmsC
LHKJJB_14720 LHKJJB_14720 29.2 Morganella morganii S3 dmsC DMSO reductase anchor subunit DmsC
HKOGLL_13340 HKOGLL_13340 29.2 Morganella morganii S5 dmsC DMSO reductase anchor subunit DmsC
F4V73_RS14160 F4V73_RS14160 28.4 Morganella psychrotolerans - DmsC/YnfH family molybdoenzyme membrane anchor subunit
PMI_RS08355 PMI_RS08355 27.9 Proteus mirabilis HI4320 - dimethyl sulfoxide reductase anchor subunit

Distribution of the homologs in the orthogroup group_301

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_301

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45002 6.38e-07 53 25 5 268 3 dmsC Anaerobic dimethyl sulfoxide reductase chain C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P76173 1.92e-06 51 28 2 159 3 ynfH Anaerobic dimethyl sulfoxide reductase chain YnfH Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00815
Feature type CDS
Gene -
Product dimethyl sulfoxide reductase anchor subunit
Location 204845 - 205657 (strand: -1)
Length 813 (nucleotides) / 270 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_301
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF04976 DMSO reductase anchor subunit (DmsC)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3302 Energy production and conversion (C) C DMSO reductase anchor subunit DmsC

Protein Sequence

MHDYQMPLVLFTVMSQWGIGAVLALSLYQWQTQNSAMLSPKALRTTIALIWLIEVIGSSMSMGHLGDPLGAYRSVLGVAHSWLSREAIAFVMLNGLISLWALASWLQPNKIRRNSLLGLFCGLIGLPVILITAQIYYQMQTHALWHTPATQISFIGTALLLGFGSVIPWLQLQGKKTIHTLHFGAFIGLLLVLMGLVIRVQISGANVASLLLWWQVIASLIIGCVIITLSRSSLFTKALISIITIFILFSGEIAGRMLFYGNVMSQSPWF

Flanking regions ( +/- flanking 50bp)

CATACCATCAGTCATCCTAATATTGTCATTATTGGTATGGAGGATTAACCATGCATGATTATCAAATGCCTTTGGTTCTATTCACCGTAATGAGTCAATGGGGGATCGGTGCCGTACTTGCCTTATCTCTTTATCAATGGCAAACACAAAACTCCGCCATGTTAAGCCCCAAAGCGTTACGTACAACGATTGCCCTTATTTGGTTAATTGAAGTAATTGGTTCTTCTATGTCAATGGGACACCTAGGCGATCCTCTCGGCGCTTATCGCTCAGTACTTGGTGTTGCTCACTCATGGTTAAGTCGTGAAGCTATTGCCTTTGTTATGTTAAACGGTTTAATTTCCCTCTGGGCATTAGCAAGTTGGCTACAACCAAATAAAATACGCCGTAATAGCCTACTAGGTCTGTTCTGTGGCCTTATTGGCTTACCCGTTATTTTAATAACAGCACAAATTTATTATCAAATGCAAACACATGCGTTATGGCATACCCCCGCAACACAAATAAGTTTTATTGGTACGGCCCTATTATTGGGTTTTGGCTCTGTTATTCCTTGGTTACAGTTGCAAGGTAAAAAAACCATTCATACATTGCATTTCGGTGCTTTTATCGGCTTACTGTTAGTATTGATGGGATTAGTAATACGAGTCCAAATTTCAGGTGCTAACGTAGCGAGCTTATTGTTATGGTGGCAAGTCATCGCCAGTTTAATAATAGGATGTGTTATTATCACACTATCTCGTAGCTCTTTGTTTACAAAGGCTTTAATATCAATTATTACTATTTTTATCCTTTTTAGCGGTGAAATCGCCGGCAGAATGCTATTTTATGGCAATGTGATGTCCCAATCACCTTGGTTTTAATTTTTATTTTCCCTAACATGAGTCCTATTTATTTTGCCCCAAATTTATTT