Orthogroup:group_301


Homologs in group_301

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07925 FBDBKF_07925 Morganella morganii S1 afuA ABC-type Fe3+ transport system, periplasmic component
EHELCC_13755 EHELCC_13755 Morganella morganii S2 afuA ABC-type Fe3+ transport system, periplasmic component
NLDBIP_14200 NLDBIP_14200 Morganella morganii S4 afuA ABC-type Fe3+ transport system, periplasmic component
LHKJJB_08650 LHKJJB_08650 Morganella morganii S3 afuA ABC-type Fe3+ transport system, periplasmic component
HKOGLL_08200 HKOGLL_08200 Morganella morganii S5 afuA ABC-type Fe3+ transport system, periplasmic component
F4V73_RS13060 F4V73_RS13060 Morganella psychrotolerans - ABC transporter substrate-binding protein
PMI_RS00915 PMI_RS00915 Proteus mirabilis HI4320 - ABC transporter substrate-binding protein
PMI_RS15205 PMI_RS15205 Proteus mirabilis HI4320 - putative 2-aminoethylphosphonate ABC transporter substrate-binding protein

Distribution of group_301 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_301 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_301

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_301.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 afuA 5
2 - 3

Product

# Product Occurence
1 ABC-type Fe3+ transport system, periplasmic component 5
2 ABC transporter substrate-binding protein 2
3 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1840 8 P Inorganic ion transport and metabolism (P) ABC-type Fe3+ transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02012 8 iron(III) transport system substrate-binding protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13343 8 Bacterial extracellular solute-binding protein

Annotations of the 23 SwissProt hits

Annotation Number of occurrences
Fe(3+)-binding periplasmic protein 1
Iron deficiency-induced protein A 2
Iron uptake protein A2 1
Iron-utilization periplasmic protein 1
Major ferric iron-binding protein 3
Phosphoglycerate transport regulatory protein PgtC 2
Probable ABC transporter periplasmic-binding protein y4fP 1
Probable binding protein component of ABC iron transporter PA5217 1
Putative 2-aminoethylphosphonate-binding periplasmic protein 4
Spermidine/putrescine-binding periplasmic protein 4
Spermidine/putrescine-binding periplasmic protein 1 1
Spermidine/putrescine-binding periplasmic protein 2 1
Uncharacterized protein HI_0131 1

Protein length

Min length 336
Max length 343
Mean length (sd) 342.1 (2.5)
Median length 343.0

Protein length distribution