PF04205


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04205, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04205
Description FMN-binding domain

Occurence in the database

PF04205 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_929 FBDBKF_05045 15600 16226 1 rsxG electron transport complex subunit RsxG Morganella morganii S1
1 group_2016 FBDBKF_15140 39297 40091 1 nqrC Na(+)-translocating NADH-quinone reductase subunit C Morganella morganii S1
2 group_2016 EHELCC_11105 44815 45609 -1 nqrC Na(+)-translocating NADH-quinone reductase subunit C Morganella morganii S2
3 group_929 EHELCC_12545 165268 165894 -1 rsxG electron transport complex subunit RsxG Morganella morganii S2
4 group_2016 NLDBIP_11450 44815 45609 -1 nqrC Na(+)-translocating NADH-quinone reductase subunit C Morganella morganii S4
5 group_929 NLDBIP_12885 165223 165849 -1 rsxG electron transport complex subunit RsxG Morganella morganii S4
6 group_2016 LHKJJB_11310 44815 45609 -1 nqrC Na(+)-translocating NADH-quinone reductase subunit C Morganella morganii S3
7 group_929 LHKJJB_12745 165268 165894 -1 rsxG electron transport complex subunit RsxG Morganella morganii S3
8 group_2016 HKOGLL_09920 44815 45609 -1 nqrC Na(+)-translocating NADH-quinone reductase subunit C Morganella morganii S5
9 group_929 HKOGLL_11360 165268 165894 -1 rsxG electron transport complex subunit RsxG Morganella morganii S5
10 group_929 F4V73_RS05485 1167015 1167641 1 rsxG electron transport complex subunit RsxG Morganella psychrotolerans
11 group_2016 F4V73_RS12305 44522 45316 -1 Na(+)-translocating NADH-quinone reductase subunit C Morganella psychrotolerans
12 group_2016 PMI_RS01695 404399 405184 1 Na(+)-translocating NADH-quinone reductase subunit C Proteus mirabilis HI4320
13 group_929 PMI_RS06310 1383809 1384435 1 rsxG electron transport complex subunit RsxG Proteus mirabilis HI4320