Orthogroup:group_2055


Homologs in group_2055

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15405 FBDBKF_15405 Morganella morganii S1 rbsC ribose ABC transporter permease
EHELCC_15765 EHELCC_15765 Morganella morganii S2 rbsC ribose ABC transporter permease
NLDBIP_16605 NLDBIP_16605 Morganella morganii S4 rbsC ribose ABC transporter permease
LHKJJB_16200 LHKJJB_16200 Morganella morganii S3 rbsC ribose ABC transporter permease
HKOGLL_15970 HKOGLL_15970 Morganella morganii S5 rbsC ribose ABC transporter permease
F4V73_RS17740 F4V73_RS17740 Morganella psychrotolerans rbsC ribose ABC transporter permease
PMI_RS00435 PMI_RS00435 Proteus mirabilis HI4320 rbsC ribose ABC transporter permease

Distribution of group_2055 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2055 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2055

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2055.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rbsC 7

Product

# Product Occurence
1 ribose ABC transporter permease 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1172 7 G Carbohydrate transport and metabolism (G) Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K10440 7 ribose transport system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02653 7 Branched-chain amino acid transport system / permease component

Annotations of the 82 SwissProt hits

Annotation Number of occurrences
Autoinducer 2 import system permease protein LsrC 28
Autoinducer 2 import system permease protein LsrD 28
D-allose transport system permease protein AlsC 1
Fructose import permease protein FrcC 1
Fructose import permease protein FruF 1
Fructose import permease protein FruG 1
Galactofuranose transporter permease protein YtfT 1
Galactose/methyl galactoside import permease protein MglC 4
Inner membrane ABC transporter permease protein YjfF 1
L-arabinose ABC transporter permease protein AraH 1
L-arabinose transport system permease protein AraH 2
Probable ABC transporter permease protein YphD 1
Probable ABC transporter permease protein y4mJ 1
Ribose import permease protein RbsC 5
Xylose transport system permease protein XylH 5
Xylose/arabinose import permease protein XylH 1

Protein length

Min length 321
Max length 323
Mean length (sd) 322.7 (0.8)
Median length 323.0

Protein length distribution